Sus scrofa (pig): 100514823
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Entry
100514823 CDS
T01009
Symbol
NLRP3
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3
KO
K12800
NACHT, LRR and PYD domains-containing protein 3
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04217
Necroptosis
ssc04621
NOD-like receptor signaling pathway
ssc04623
Cytosolic DNA-sensing pathway
ssc04625
C-type lectin receptor signaling pathway
ssc05132
Salmonella infection
ssc05133
Pertussis
ssc05135
Yersinia infection
ssc05164
Influenza A
ssc05171
Coronavirus disease - COVID-19
ssc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100514823 (NLRP3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100514823 (NLRP3)
04623 Cytosolic DNA-sensing pathway
100514823 (NLRP3)
04625 C-type lectin receptor signaling pathway
100514823 (NLRP3)
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
100514823 (NLRP3)
05164 Influenza A
100514823 (NLRP3)
09171 Infectious disease: bacterial
05132 Salmonella infection
100514823 (NLRP3)
05135 Yersinia infection
100514823 (NLRP3)
05133 Pertussis
100514823 (NLRP3)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100514823 (NLRP3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100514823 (NLRP3)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ssc04054
]
100514823 (NLRP3)
Membrane trafficking [BR:
ssc04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
100514823 (NLRP3)
Pattern recognition receptors [BR:
ssc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100514823 (NLRP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
PYRIN
NOD2_WH
FISNA
LRR_6
LRR_4
nSTAND3
NB-ARC
DNA_pol3_delta
Motif
Other DBs
NCBI-GeneID:
100514823
NCBI-ProteinID:
NP_001243699
UniProt:
A0A8D1EM40
H2EW08
LinkDB
All DBs
Position
2:complement(56892241..56977412)
Genome browser
AA seq
1036 aa
AA seq
DB search
MSMASVRCKLARYLEDLEDVDFKKFKMHLEDYPSQKGCISLPRGQTEKADHVDLATLMID
FNGEEKAWAMATWIFAAINRRDLYEKAKRDEPEWDNANLSVISQEESLEEEWMGLLGYLS
RISICKKKKDYCKKYRKHVRSRFQCIKDRNARLGESVNLNKRFTRLRLIKEHRSQQEREH
ELLAIGRTSAKMQDGPVSSLNLELLFDPEDQHSEPVHTVVFQGAAGIGKTILARKIMLDW
ASEKLYQEKFDYLFYIHCREVSLGTRRSLGDLIASCCPGPNPPIGKIVSKPSRILFLMDG
FDELQGAFDERTEALCTNWQKVERGDILLSSLIRKRLLPEASLLITTRPVALEKLQHLLG
RARHVEILGFSEAKRKEYFFKYFSDEQQAREAFRLIQENEVLFTMCFIPLVCWIVCTGLK
QQMDSGKSLARTSKTTTAVYIFFLSTLLQSQEGSQDHHVSATLWGLCSLAADGIWNQKIL
FEECDLRNHGLQKADVSAFLRMNLFQKEVDCEKFYSFIHMTFQEFFAAMYYLLEKEDQGE
MRNVPRSCLKLPSRDVTVLLENYGKFEKGYLIFVVRFLFGLVNQERTSYLEKKLSCKISQ
KIRLELLKWIEAKAKAKKLQIEPSQLELFYCLYEMQEEDFVQKAMGHFPKIEINLSTRMD
HVVSSFCIENCRHVESLSLRLLHNSPKEEEEEEEIEEEDVQHSDVDNCILSESHVAYSQR
LVNYLTSSFCSGIFSVLSNNWNLTELNLSGNSLGDPGMKVLCETLQQPGCNIRRLWLGQC
CLSHQCCFNISSVLSNNQKLVELDLSHNALGDFGIRLLCVGLRHLFCKLKKLWLVSCCLT
SACCEDLASVLSSNHSLTRLYLGENALGDSGVGILCEKAKHPQCNLQKLGLVNSGLTSGC
CLALSSVLSTNQNLTHLYLRGNALGDIGVKQLCEGLLHPNCKLQVLELENCSLTSHCCWD
LSTLLTSNQSLRKLSLGNNDLGDLGVMLLCEVLKQQGCLLKSLKLCEMYFNYDTKHALQT
LQEEKPELTIVFEPSQ
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggcaagcgtccgctgcaagctggctcgttacctggaggacctagaagatgta
gattttaagaaattcaagatgcacttagaagactatccttctcagaagggctgcatctct
ctccctcggggccagacagaaaaagcagatcatgtggatctagccactctgatgatagat
ttcaatggagaggagaaggcatgggccatggccacatggatttttgctgcgatcaacagg
agagacctttatgagaaagctaagagggatgagccagaatgggacaatgcaaatctttct
gtgataagccaggaagaaagccttgaagaggaatggatgggtttactggggtacctttcc
agaatctctatttgtaagaaaaagaaagattattgtaagaagtacagaaagcacgtgaga
agcagattccagtgcatcaaagacaggaatgcacgtctgggtgagagtgtgaacctcaac
aaacgcttcaccaggctgcgtctcatcaaggaacaccggagtcagcaggagagggagcat
gagctccttgccattggcaggacctcagccaagatgcaagatggccccgtgagttccctg
aacttggaattgctgtttgatcctgaggaccaacactctgagcctgtgcacacggtagta
ttccagggagcagcaggcattgggaaaacaatactggccaggaagatcatgttggactgg
gcatcagagaaactttaccaggaaaaatttgactatttgttttacattcactgtcgggag
gtgagcctaggaactcggaggagcctgggagacctgatcgccagctgctgccctggccca
aacccacccataggcaagattgtgagcaagccttccaggatcctcttcctcatggatggc
tttgatgagctgcaaggtgcctttgatgagcgcacagaggcactctgcacaaactggcag
aaggtggagcggggagacattctcctgagcagcctcatcagaaaaagactgcttcctgag
gcctccctgctcatcaccacaagacctgtggccctggagaaacttcagcacttgctgggc
cgggctcgtcatgtggagattctgggtttctcagaggccaagaggaaggaatatttcttt
aagtatttttcagatgaacagcaagcaagggaagccttcaggctgattcaggagaatgag
gtcctgttcaccatgtgctttattcccctggtctgctggattgtgtgcactgggctgaaa
cagcagatggatagcggcaagagtcttgccaggacatccaagaccaccactgccgtgtat
atcttcttcctctccactttgttgcaatctcaagaagggagccaggaccaccacgtctct
gccaccctctggggtctctgctcactggctgcggatggaatctggaatcagaaaatcctg
tttgaggagtgtgatctcaggaaccatggcctgcagaaggcagatgtgtctgctttcctg
aggatgaacctattccaaaaggaagtagactgtgagaaattctacagcttcattcacatg
actttccaggagttctttgctgccatgtactatctactggaaaaggaggatcagggggag
atgaggaatgtgccacgaagctgtttgaagcttcccagtcgagacgtgacagttcttctt
gaaaactatggcaaatttgaaaaggggtatctgatttttgttgtccgtttcctctttggc
cttgtaaaccaggagagaacgtcctacttggagaaaaaactgagttgtaagatctctcag
aaaatcaggctagagctgcttaaatggattgaagcgaaagccaaggccaagaagctacag
attgagcccagccagctggaattattttactgtttgtacgaaatgcaggaggaggacttt
gtgcaaaaggccatgggccatttccctaaaattgagatcaatctctccaccagaatggac
catgtagtttcttctttttgtattgagaactgtcgccatgtggaatcactttctctgagg
ttgctccataattcacccaaagaggaggaggaggaagaggagatagaggaggaggatgtt
caacactctgatgtggacaattgtatcctctctgagtctcatgttgcatattctcagcga
ttggtgaactatctcacttccagcttttgtagtggcatcttctcagtcctgagcaataac
tggaatctcactgaattgaacctcagtggtaacagcctgggagacccagggatgaaggtg
ttatgtgaaacgctccagcaacctggctgtaacattcgaagattatggttgggacagtgt
tgcctgtcccatcagtgctgcttcaacatctcctctgtcctgagcaacaaccagaagttg
gtggaactggatctgagccacaatgccctgggagactttgggatcagacttttgtgtgtg
ggactgaggcatctattctgcaagctaaagaagctctggttggtcagttgctgtctcaca
tcagcgtgttgtgaggatcttgcgtccgtcctgagcagcaatcattccctgaccagactc
tacttgggtgaaaatgccctgggagactcaggagttggaattttatgtgaaaaagcaaag
catccacaatgtaacctgcaaaaactggggttggtgaattctggccttacatcaggttgt
tgtctagctctatcctcagtgctcagcacgaaccagaatctcactcacctctatctacgg
ggaaatgctcttggagacatcggagtcaagcaactctgtgagggactgttgcacccgaac
tgcaagcttcaagtgttggaattagagaactgcagcctcacatcacactgctgctgggat
ctttccacacttctgacttctaaccagagcctgcgaaagctgagcctaggcaacaatgac
ctgggtgatctgggggtcatgctactctgtgaagtgttgaaacagcaggggtgcctcctg
aaaagccttaagttgtgtgaaatgtatttcaattatgatacaaaacatgcattacaaaca
ctgcaagaagaaaagcctgagttgaccattgtctttgagccttcccagtag
DBGET
integrated database retrieval system
