Sus scrofa (pig): 100515021
Help
Entry
100515021 CDS
T01009
Gene name
EML4
Definition
(RefSeq) echinoderm microtubule-associated protein-like 4 isoform X3
KO
K15420
echinoderm microtubule-associated protein-like 4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05200
Pathways in cancer
ssc05223
Non-small cell lung cancer
ssc05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100515021 (EML4)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
100515021 (EML4)
09162 Cancer: specific types
05223 Non-small cell lung cancer
100515021 (EML4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
100515021 (EML4)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EMAP
100515021 (EML4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HELP
WD40
ANAPC4_WD40
Ribosomal_S7
SlyX
Motif
Other DBs
NCBI-GeneID:
100515021
NCBI-ProteinID:
XP_003125244
Ensembl:
ENSSSCG00000008467
UniProt:
A0A287AHD3
LinkDB
All DBs
Position
3
AA seq
992 aa
AA seq
DB search
MDGFAGSLDDSISAASTSDVQDRLSALELRVQQQEDEITVLKAALADVLRRLAISEDHVA
SVKKSVPSKGQPGLREAISMSCITNGSGSNRKPSHTSSVSIARKETLSSAAKSGTEKKKE
KPQGQREKKEESHSNDQSPQIRASPSPQPSSQPLQIHRQTQESKNSTPTKSIKRPATAEK
SHNSWENSDDSRNKLFKAVSTSKLISKVIKNTDKHKDVIINQAKMSTREKNSQEGEYIKM
FMRGRPITMFIPSDVDNYDDIRTELPPEKLKLEWVYGYRGKDCRANVYLLPTGEIVYFIA
SVVVLFNYEERTQRHYLGHTDCVKCLAIHPDKIRIATGQIAGVDKDGRPLQPHVRVWDSV
SLSTLQIIGLGTFERGVGCLDFSKADSGVHLCVIDDSNEHMLTVWDWQKKSKGAEIKTTN
EVVLAVEFHPTDANTIITCGKSHIFFWTWSGNSLTRKQGVFGKYEKPKFVQCLAFLGNGD
VLTGDSGGIILIWNKTTVEPTPGKGPKGVYQISKQIKAHDGSVFTFCHMRNGMLLTGGGK
DRKIILWDHDLNPEREIEVPDQYGTIRAVAEGKADQFLVGTSRNFILRGTFNDGFQIEVQ
GHTDELWGLATHPFKDLLLTCAQDRQVCMWNSAEHKLEWTRLVDEPGHCADFHPSGTVVA
IGTHSGRWFVLDAETRDLVSIHTDGNEQLSVMRYSVDGTLLAVGSHDNFIYLYVVSENGR
KYSRHGKCTGHSSYITHLDWSPENKYIMSNSGDYEILYWDIKENCKLIRNRSHCKDIDWT
TYTCVLGFQVFGVWPEGSDGTDINALVRSHNRRVIAVADDFCKVHLFQYPCSKAKAPSHK
YSAHSSHVTNVSFTHNDSHLISTGGKDMSIIQWKLVEKLPLPQNEIVADTTLTKAPISSI
ESIMQSDTPTPPPSQPSNETAEEESRVSSSPTLLENSLEQTVEPSEGRSEEQSEGGSEEL
GEPVCEEPASEISEEHGEAALPEDQQDPSPLS
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggacggtttcgccggcagcctcgatgatagtatttctgctgcaagtacttctgatgtt
caagatcgcctctcagctcttgagttaagagttcaacaacaagaagatgaaatcactgtg
ctaaaggcagctttggctgatgttttaaggcgtcttgcaatctctgaagatcatgtagcc
tcagtgaagaaatcagtcccaagtaaaggccagccaggccttcgagaagctatttccatg
tcctgtataaccaatgggagtggttcaaacagaaaaccaagtcacaccagctctgtctca
atcgcaagaaaagaaactctttcatctgctgctaaaagtggtacagaaaaaaagaaagaa
aaaccacaaggacagagagaaaaaaaagaggaatctcactctaatgatcaaagtccacaa
attcgagcatcaccttctccccaaccctcttcacagcctctccaaatacacagacaaact
caagaaagcaagaattctactcccaccaaaagcataaaacgaccagcaacagctgaaaag
tcacataattcatgggaaaattcagatgatagccgtaacaaattattcaaggcagtttca
acatcaaaattaatatccaaagttataaaaaatacagacaagcataaagatgtcatcatc
aaccaagcaaaaatgtcaacccgtgaaaaaaacagtcaagaaggagaatatattaaaatg
tttatgcgaggtcggccaatcacaatgttcattccttctgatgttgacaactatgacgac
atcagaacagaactgcctcctgagaagctcaaactggagtgggtatatggttatcgtgga
aaggactgtcgggctaatgtttaccttcttcctactggggaaattgtttatttcatagca
tcagtagtagtactatttaattatgaggagagaactcaacgacactacctgggtcataca
gactgtgtgaaatgccttgctatacatcctgacaaaattaggattgcaactggacagata
gctggagtggataaggatggaaggcctttgcaaccccatgttagagtgtgggattcagtt
agtctatctacactgcagattattggacttggaacttttgagcgtggagttggatgcctg
gatttttcaaaagcagattcaggtgttcatttatgtgttatcgatgactccaatgagcac
atgcttactgtatgggattggcagaaaaaatcaaaaggagcagaaataaagacaacaaat
gaagtcgttttggctgtggaattccatccaacagatgcaaataccataataacatgtggt
aaatctcatatttttttctggacctggagtggcaattcactaacaagaaaacagggagtt
tttgggaaatatgaaaaaccaaaatttgtgcagtgtttagcattcttggggaatggagat
gtgcttactggagactcaggtggaatcatacttatatggaacaaaactactgtagaaccc
acacctgggaaagggccaaaaggtgtttatcagatcagcaaacagattaaagctcatgat
ggcagtgtgttcacattctgtcacatgagaaatgggatgttattaactggaggcgggaaa
gatagaaaaataattctatgggatcatgatctgaatcctgaaagagaaatagaggttcct
gatcagtatggaacaatcagagctgtagcggaaggaaaagcagatcaattcttagtcggc
acatcacgaaactttattttacggggaacattcaacgatggcttccaaatagaagtacag
ggtcacacagatgagctttggggtcttgccacacatcccttcaaagatttgctcttgact
tgtgctcaggatagacaggtgtgcatgtggaactcggcagaacacaagctggaatggacc
aggctcgtagatgaaccaggacactgtgcagattttcatccaagtggcacagtggtggcc
ataggaacgcactcaggcaggtggtttgttctggatgcagaaaccagagatctagtttct
atccacacagatgggaatgaacagctctctgtgatgcgctactcagtagatggcaccctc
ctggccgtaggatctcacgacaactttatttacctctatgtggtctctgaaaatggaaga
aaatatagcaggcatggaaagtgcactggacattccagctatatcacacaccttgactgg
tccccagaaaacaagtatataatgtctaactcgggagactatgagatactgtactgggac
attaaagagaactgcaaactaatcaggaatcgatcacactgtaaggacatcgattggaca
acatatacctgtgtgctaggctttcaagtcttcggtgtctggccagaaggatccgatggg
acagatatcaatgcgctcgtgcgctcccacaatagaagagtgatcgctgtggctgatgac
ttttgcaaagtccatctgtttcagtatccctgctccaaagcgaaggctcccagtcacaag
tacagtgcccacagcagccatgtcaccaatgtcagttttactcacaatgacagtcacctg
atttcaactggtggaaaagacatgagcatcattcagtggaaacttgtggaaaagttacct
ctgcctcaaaatgagattgtagcggatactacgctaaccaaagcccccatctcttccatt
gagagcatcatgcagtccgatactcccacgccacctccttcccagccctcaaatgagaca
gctgaagaagaaagtagggtaagcagttctcccacacttctggagaacagcctggaacag
actgtggagcccagcgaaggccgcagcgaggagcagagcgaggggggcagtgaagagctg
ggcgagcctgtctgtgaagagccagccagtgagataagcgaggagcacggcgaagccgct
cttcccgaggaccagcaagacccctcacccctgtcctaa
Sus scrofa (pig): 100518423
Help
Entry
100518423 CDS
T01009
Gene name
ALK
Definition
(RefSeq) ALK tyrosine kinase receptor
KO
K05119
anaplastic lymphoma kinase [EC:
2.7.10.1
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05200
Pathways in cancer
ssc05223
Non-small cell lung cancer
ssc05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100518423 (ALK)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
100518423 (ALK)
09162 Cancer: specific types
05223 Non-small cell lung cancer
100518423 (ALK)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssc01001
]
100518423 (ALK)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ssc04090
]
100518423 (ALK)
Enzymes [BR:
ssc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
100518423 (ALK)
Protein kinases [BR:
ssc01001
]
Receptor tyrosine kinases (RTK)
ALK family
100518423 (ALK)
CD molecules [BR:
ssc04090
]
Proteins
100518423 (ALK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
MAM
Pkinase
Gly_rich
Nup96
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
100518423
NCBI-ProteinID:
XP_020943328
Ensembl:
ENSSSCG00000008533
Vega:
OTTSUSG00000002319
LinkDB
All DBs
Position
3
AA seq
1620 aa
AA seq
DB search
MGAIGLLWPLLLLLLLAAASSSGTGTETGQRVVSPAMGLALQPREPLSYSRLQRKSLAVD
FVVPSLFRVYARDLLLPPLSPSEPRTGRLEARGSLVLDCAPLLRLVGPSPEVSWTAGASS
PAPAQARTLSRVLKGGSIRKLRRAKQLVLELGEEAILEGCVGPPEETTVGLLQFNLSELF
SWWIRHGEGRLRIRLMPEKKASEVGREGRLSAAIRASQPRLLFQILETRTGHISLESPTN
LPSLPPDSFAWNLTWIMKDSFPFLSHRSRYGLECSFDFPCELEYSPPLHNRGNQSWSWRR
VPSEEASQMDLLDGPETEHSKEMPRGAFLLLNTSANSKHTILSPWMRSSSEHCRLAVSVH
RHLQPSGRYVAQLLPHNEAGREIVLVPTPGKHGWTVLQGRIGRPENPFRVALEYISSGNR
SLSAVDFFALKNCSEGTSLGSKMALQSSFTCWNGTVLQLGQACDFHQDCAQAEDEGQLCS
KLPAGFYCNFENGFCGWTQSSLSRHMPQWQVKALQDAQTQDHQGHALVLSTTDAPTSASA
TVTSAAFPPPMKSSPCELRMSWLIRGVLQGNVSLVLVENKTGKEQSRMIWQVATIEGLNL
WQWTVLPLLDVADRFWLQIVAWWGQGSRATVAFDNISVSLDCYLTISGEDKLPQNTAPKS
RNLFERNPNKEPKAWENTPGETPIFDPTVHWLFTTCGASGPHGPTQAQCNNAYRNSNLSV
VVGSEGPLKGIQTWKVPATDTYSISGYGAAGGKGGKNTMMRSHGVSVLGIFNLEKDDTLY
ILVGQQGEDACPSTNRLIQKVCIGENNVIEEEIRVNRSVHEWAGGGGGGGGATYVFKMKD
GVPVPLIIAAGGGGRAYGAKTDTFHPERLENNSSVLGLNGNSGAAGGGGGWNDNTSLLWS
GKSLLEGATGGHSCPQAMKKWGWETRGGFGGGGGGCSSGGGGGGYIGGNAASNNDPEMDG
EDGVSFINPLGILYTPALKVMEGHGEVNIKHYLNCSHCEVDECHMDPESHKVICFCDHGT
VLAEDGVSCIVSPTPEPQLPLSLILSVVTSALVAALVLAFSGVMIVYRRKHQELQAMQME
LQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYE
GQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQALPR
FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA
RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT
WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPED
RPNFAIILERIEYCTQDPDVINTALPVEYGPLVEEEEKVPMRPKDPEGIPPLLVAAPQPR
REEGPEPAAPPPPPAASSGKAGKKAAAAELAVRGPRGAAADGGHVNMAFAPSSAPSELHK
VQGSRNKPTSLWNPTYGSWFTEKPTPKNSPPAKREPPGRGSLGREGSCGGPSAAAPGRLP
GAALLLEPSSLTADVKDVPLFRLRHFPCGTVHYGYQQQGFPPEAAPGRSPDPALKGQAAP
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgggagccatagggcttctatggccgctgctgctgctgctgcttttagcggcagcctcg
agttccgggactgggacagaaaccggccagcgcgtggtctcaccggccatggggctggca
ctgcaaccccgggagccgcttagctactcgcgcttgcagagaaagagcctggcggtggac
tttgtggtgccctcgctctttcgcgtctatgcccgggacctgctgctgccgccgctgtcc
ccctcggaaccgaggactggccggctggaggcacgcggctctctggttctcgactgcgcc
ccactgcttaggctggtggggccttcacccgaggtctcctggacagcaggtgccagctct
cccgccccggcccaggcacggacgctgtccagggtgctgaagggaggctctattcgcaag
ctccggcgcgccaagcagctggtgctggagctcggagaggaagcgatccttgagggctgt
gtagggccccccgaggagacgacggtggggctgctccagttcaacctcagtgagctgttc
agctggtggattcgccacggcgaagggcggctgaggatccgcctgatgcccgagaagaag
gcgtcggaagtgggcagagagggaaggctgtccgctgcgatccgcgcctcacagccccgc
cttctcttccagatcttggagaccaggaccggtcacatctccttggagtcaccgacaaac
ctaccttcccttcctcctgattcttttgcatggaatctgacctggataatgaaagattcc
ttccctttcctgtctcatcgcagccgatatggtctggaatgcagctttgacttcccctgc
gagctggagtattcccctccactgcataaccgagggaaccagagctggtcctggcgccgc
gtcccctctgaggaggcctcccagatggacctgttggatgggcccgagacagagcattcc
aaggagatgcccagaggcgccttcctcctcctcaacacctcggccaactccaagcacacc
atcctgagcccgtggatgaggagcagcagtgagcactgcaggctggccgtctcggtgcac
aggcacttgcagccctctgggaggtacgtcgcccagctgctgccccacaacgaagctgga
agagagattgtcctggtacccactccagggaagcatggttggactgtgctgcagggaaga
attgggcgtccagagaacccattccgagtggccttggaatacatttcgagtggaaaccga
agcttgtctgcagtggacttctttgccctgaagaactgcagtgaaggaacgtccctgggc
tccaagatggccttgcagagttccttcacttgctggaatgggacagtcctccagctcggg
caggcctgcgacttccatcaggactgtgcccaggcagaagacgagggccaactgtgcagt
aaactcccggctggtttttactgcaacttcgagaatggcttctgtggctggacccaaagc
tcactgtcacgccacatgccccagtggcaggtcaaagccttacaggatgcccagacccag
gaccaccaaggccacgccctggtgctcagcaccactgacgcccccacttctgcgagtgcc
acggtgaccagcgctgcatttcccccgccgatgaagagctctccgtgtgagctccgaatg
tcctggctcatccgtggagtgttgcagggaaacgtctccctggtgctggtggagaacaaa
accgggaaggagcaaagcagaatgatctggcaggtcgccaccatcgaaggcttgaacctg
tggcagtggacggtgctccctctcctcgatgtggccgacaggttctggctgcagattgtc
gcctggtggggacaaggatccagagccaccgtggctttcgacaatatctccgtcagcctg
gactgctacctcaccatcagtggggaggacaagctgccacagaacacggcacctaaatca
agaaatctgtttgagagaaacccaaacaaggagccgaaagcctgggaaaatacaccggga
gagacccccatctttgaccctacagttcactggctgttcaccacgtgcggggccagtggg
ccccacggccccacgcaggcccagtgcaacaacgcctaccggaactccaacctgagcgtg
gtggtggggagcgagggccccctgaagggcatccagacctggaaggtgccagccaccgac
acctacagcatctcaggctacggagccgccggcgggaaaggcgggaagaacaccatgatg
cggtcccacggcgtgtctgtgctgggcatcttcaacctggagaaggacgacaccctgtac
atcctggtcgggcagcagggggaggacgcctgccccagtaccaaccgattaatccagaaa
gtctgcattggcgagaacaacgtgatcgaagaagagatccgcgtgaacagaagcgtgcac
gagtgggccggagggggcggaggagggggcggagccacctacgtgtttaagatgaaggat
ggcgtgccagtgcccctgatcattgcagctggcggtggtggcagggcctacggggccaag
acagacacgttccaccctgagaggctggagaataactcctcagttctagggctgaacggc
aattctggagccgcaggtggcggaggtggctggaatgataacacttccttgctctggtct
ggaaaatctttgctggagggcgccaccggaggacattcctgcccccaggccatgaagaag
tgggggtgggagacaagagggggtttcggagggggtggcggggggtgctcctcaggtgga
ggaggcggaggatatataggtggcaatgcggcctcaaacaatgaccccgagatggacggg
gaggatggggtttctttcatcaacccactgggcatcctgtacaccccggctctaaaagtg
atggagggccatggggaagtgaatattaagcattacctaaactgcagccactgtgaggtc
gatgagtgccacatggaccccgagagccacaaggtcatctgcttctgtgaccatgggaca
gtgctggctgaggacggtgtctcctgcatcgtgtcgcccaccccggagccccagctgccg
ctctcgctgattctctccgttgtgacctccgccctcgtggccgccctggtcctggccttc
tccggcgtcatgatcgtgtaccgccggaagcaccaggagctgcaagccatgcagatggag
ctgcagagccccgagtacaagctaagcaagctccgtacctcgaccatcatgaccgactac
aaccccaactactgctttgccggcaagacttcctccatcagtgacctgaaggaggtgcct
cggaaaaacatcaccctcatccggggtctgggccatggcgcgtttggggaggtgtatgaa
ggtcaggtgtctggaatgcccaatgacccgagccccctgcaagtggccgtaaagacgctg
cctgaggtttgttccgagcaggacgagctggatttcctcatggaagccctgatcatcagc
aaattcaaccaccagaacatcgtgcgctgtatcggggtgagtctgcaagccctgccccga
tttatcctgctggagctcatggcaggaggagacctcaagtccttcctccgggagacgcgc
cctcgcccgagtcagccctcctcgctggccatgctggacctcctgcacgtggctcgggac
attgcctgtggctgtcagtatttagaggaaaatcatttcatccaccgggacattgctgcc
aggaactgcctcttgacctgtccaggccctggcagagtggccaagattggagacttcggg
atggcccgcgacatctaccgagcgagctactaccgaaagggaggctgtgcgatgctgccg
gtcaaatggatgcccccggaggccttcatggagggaatatttacttctaaaacagacacg
tggtccttcggagtgctgctgtgggagatcttctctctcggatacatgccataccctagc
aaaagcaaccaggaagttctggagtttgtcaccagtggaggacggatggacccacccaag
aactgccccgggcctgtataccggataatgacccagtgctggcaacatcagcctgaagac
aggcccaacttcgccataattttggaaaggattgagtactgcacccaggatccagatgtg
atcaacaccgctttgcccgtagagtacggccccctcgtggaagaggaagagaaggtgccc
atgaggcccaaggaccccgagggcatcccccctctcctggtggcggctccccagccccgg
cgggaggagggccccgagccagccgcgccgccccctccgcccgccgcttcctcgggcaaa
gccgggaagaaggccgcggccgcggagctcgccgtccggggccccaggggcgcggccgcg
gacgggggacacgttaacatggccttcgctccgtccagcgcgccctcggagctgcacaaa
gtccagggctcccgaaacaagcccaccagcctctggaacccgacctacggctcctggttc
acggagaaacccaccccaaagaacagccccccggccaagcgcgagccgcccggcaggggc
agcctgggccgcgagggcagctgcggcggcccgtccgccgcggcccccggccggctcccc
ggcgccgctctgctcctcgaaccttcctcgctgacggccgacgtgaaggacgtgcctctg
ttccggctgcgtcacttcccctgcggcaccgtccactacggctaccagcagcagggcttc
cccccggaggccgcgccgggccgctccccggaccccgcgctcaaaggccaggccgcgccc
tga
DBGET
integrated database retrieval system
