Sus scrofa (pig): 100515171
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Entry
100515171 CDS
T01009
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
100515171
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100515171
Ion channels [BR:
ssc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100515171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
ATP-synt_B
IQCJ-SCHIP1
IQ
Motif
Other DBs
NCBI-GeneID:
100515171
NCBI-ProteinID:
XP_003133492
Ensembl:
ENSSSCG00000015905
UniProt:
A0A286ZLY4
LinkDB
All DBs
Position
15:71864753..71999219
Genome browser
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATPALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFEINITSFFNSSL
DGNGTTFNRTVSMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEDGVHKSESEDSIRKKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSNVSQASRASRVLPILPMNGKMHSAVDCNGVVSLIGGP
SALTSPAGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTARQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGLIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKR
KLREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEVEPEESLEPEACFTEDCVRKFKCCQISIDEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWIAYGFQVYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIESNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSCIYKKDKGKEGDGTPIKEDILTDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtactggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaagag
cgcaaggatgaggatgatgaaaatggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccatttatttatggagacatccctccagagatggtgtcagagccgctggaggac
ctggacccatactatatcaataagaaaacatttatagtattgaataaagggaaagcaatt
tctcgattcagtgccacccctgccctgtacattttaactcccttcaaccctattagaaaa
ttagctattaagattttggtacattctttattcaatgtgctcattatgtgcactattctt
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtggagtac
acctttacaggaatttatacttttgaatcacttataaaaatacttgcaaggggcttttgt
ttagaagatttcacatttctacgggatccatggaattggttggatttcacagtcattact
tttgcatatgtgacagaatttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagcattgaaaacaatttcagtcattccaggcctgaagaccatcgtgggggcc
ctaatccagtcggtgaagaagctctcagatgtaatgatcctgactgtgttctgtctgagc
gtgtttgcactaataggattacagctgtttatgggcaacctgcgaaataaatgtttacaa
tggcccccagataattcttcctttgaaataaacatcacttccttctttaatagctcattg
gatgggaacggtaccactttcaataggacagtgagcatgtttaactgggatgaatatatt
gaagataaaagtcacttttattttttggaagggcaaaacgatgctctgctttgtggcaac
agctcagatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtcgaaacccc
aactatggctacacaagctttgacacttttagctgggctttcttgtccttatttcgtctc
atgactcaagacttctgggaaaacctttatcaactgacactacgtgctgctggaaaaaca
tacatgatattttttgtgctggtcattttcttgggctcattctaccttataaatttaatc
ctggctgtggttgccatggcctatgaggaacagaaccaggcaacactggaagaggctgaa
cagaaagaagctgaatttcagcagatgcttgaacaattaaaaaagcaacaagaagaagct
caggcagcagctgcagcagcatctgctgaatcaagagacttcagtggtgctggcgggata
ggggttttctcagaaagttcttcagtagcatcaaagttgagctccaagagtgaaaaagag
ctgaaaaacagacggaagaaaaagaaacagaaagaacagtctggagaagaagaaaaggaa
gatggggtccacaaatctgaatccgaagacagcataagaaaaaaaggtttccgtttttcc
ttagaaggaagcaggctgacatatgaaaagaggttttcctctccacaccagtctttattg
agcatccgtggctcccttttctctccaagacgcaacagtagggctagccttttcagcttc
agaggtcgagccaaggatattggctctgagaatgactttgctgatgatgagcacagcacc
tttgaagacaatgacagcagaagagactctctgtttgtgccgcacagacacggggagcgg
cgccacagcaacgtcagccaggccagccgtgcctccagggtgctccctattctgcccatg
aacgggaagatgcacagcgctgtggattgcaatggcgtggtctccctgatcggaggccct
tctgccctcacatctcctgctgggcagctcctgccagagggcacaactactgaaacagaa
ataagaaagagacggtccagttcttatcatgtttcaatggatctgttggaagatcctaca
gcaaggcaaagagcaatgagtatggctagtattttgaccaacaccatggaagaacttgaa
gaatccagacagaaatgcccaccctgctggtataaatttgctaacatgtgtttgatttgg
gactgctgtaaaccatggttgaaggtgaaacatctcgtcaacctggtcgtaatggaccct
tttgttgacctggccatcaccatctgcattgtcttgaatacccttttcatggccatggag
cactatcccatgacagagcagttcagcagtgtgctgtcagttgggaacctggtcttcact
gggatctttacagcagaaatgtttctcaagataattgccatggatccgtattattacttt
caagaaggctggaatatttttgatggtttaattgtgagccttagtttaatggaacttggt
ttggcaaacgtggaaggattatcagttctccgatcatttcggctgcttagagttttcaaa
ttggcaaaatcttggccaacactgaacatgctgataaagatcattggtaactcagtcgga
gctctgggtaacctcaccttggtgttggccatcatcgtcttcatttttgctgtggttggc
atgcagctctttggcaaaagctacaaagaatgtgtctgtaagatttccaatgattgtgaa
ctcccgcgctggcacatgcatgacttcttccactctttcctgattgtgttccgggtgctg
tgtggagagtggatagagaccatgtgggactgcatggaggtcgctggtcaaaccatgtgc
cttactgtcttcatgatggtcatggtcattggaaacctggtggttctgaacctcttcctg
gccttactcttgagttcattcagttctgacaatcttgccgccactgacgacgataatgaa
atgaataatctccagattgccgtgggaaggatgcagaaaggaatcgattatgttaaaaga
aaattacgtgaatttattcagaaagcctttgttagaaagcagaaagctttagatgaaatt
aaacctcttgaagatctaaataacaaaaaagacagctgtatttccaaccatacgaccata
gaaataggcaaagacctcaattatctgaaagatggaaatggaactaccagtggcataggc
agcagtgtagaaaagtatgtcgtggatgaaagtgattacatgtcatttataaacaatccc
agcctcacagtgactgtaccaattgctgttggagaatctgactttgaaaatttaaacact
gaagaattcagcagcgagtcagatatggaggagagcaaagagaagctaaatgcaactagt
tcatctgaaggcagcacagttgatataggagctcccgctgagggagaacaacctgaggtt
gaacctgaagaatctctggagcctgaagcctgttttacagaagactgtgtgcggaagttt
aagtgttgtcaaataagcatagatgaaggcaaagggaaactctggtggaacctgagaaaa
acttgctacaagatagtggagcataactggtttgaaacattcatcgtcttcatgattctg
ctcagcagcggggcactggcctttgaagatatatatattgaacagcgaaaaaccattaag
accatgttagaatatgccgataaagttttcacttatatattcatcctggaaatgcttctc
aagtggattgcatatggctttcaagtgtattttaccaatgcctggtgctggctagatttc
ctgattgtcgatgtctcattggttagcttaactgcaaatgctttgggttactccgaactt
ggtgccatcaaatccctcagaacactaagagctctgaggccattgagagccttatcccga
tttgaaggaatgagggttgttgtcaatgctcttttaggagccattccatccataatgaat
gtacttctggtttgtctgatcttttggttaatattcagtatcatgggagtgaatctcttt
gctggcaaattttatcactgtattaactacaccactggagaaatgtttgatgtcagtgtg
gtcaacaactacagcgagtgtaaggccctcatagagagcaacgaaactgctcggtggaag
aatgtgaaagtcaactttgataatgtgggacttgggtatctttctctgcttcaagtagcc
acatttaagggatggatggatatcatgtatgctgctgttgattcacgaaatgtagaatta
caacccaagtatgaagacaatctgtacatgtatctttattttgtcatctttattattttt
ggttcgttctttactctgaatcttttcattggtgtcatcatagataacttcaaccaacag
aaaaagaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcaatgaaaaagctgggttcaaagaaaccacagaaacccatacctcgacctgctaacaaa
ttccaaggaatggtctttgattttgtaaccaaacaagtctttgatatcagcatcatgatc
cttatctgcctcaacatggtcaccatgatggtggaaactgatgaccagagtcaagaaatg
acaaacattctatactggattaacctggtatttattgttctgttcactggagaatgtgtg
ctgaaactaatttctcttcgttattactatttcaccatcggatggaatatctttgatttt
gtggtggtcattctctccattgtaggtatgtttctggctgagctgatagagaaatatttt
gtgtcccctaccctgttccgagtgatccgtcttgccaggattggccgcatcctgcgtctg
atcaaaggggccaaggggatccgcacgctgctctttgctttgatgatgtccctgcctgcg
ctgttcaacatcggcctcctgctcttcctggtcatgttcatctacgccatctttggaatg
tccaacttcgcctatgttaagagggaggtgggaattgatgacatgttcaactttgagacc
tttggcaatagcatgatctgcctgttccagatcaccacctctgctggctgggatggactg
ctagcacctattcttaatagtgggcctccagactgtgatcctgaaaaagatcaccctggc
agctcagttaagggagactgcgggaacccatctgttgggattttcttctttgtcagttac
attatcatatcatttctggtcgtggtgaacatgtacatcgctgtcatcctcgagaacttc
agtgttgctactgaagaaagtgcagagcccctgagtgaggatgactttgagatgttctat
gaggtgtgggagaagtttgatcccgatgccacccagttcatagagttctccaagctctca
gattttgcggctgccctggatcctcctctcctcatagcaaaaccaaacaaagtccagctc
attgccatggatctgcctatggtcagtggagacaggatccactgcctcgacattttattt
gcttttacaaagcgtgttttgggtgagagtggagagatggatgctcttcgaatacagatg
gaagaaagattcatggcctcaaacccctccaaagtctcctatgaacccattacaaccact
ttgaaacgcaaacaagaggaggtgtctgctattgttatccagagggcttatagacgctac
ctcttgaagcaaaaggttaaaaaagtttcgtgtatatataaaaaggacaaaggcaaagaa
ggtgatggaacacccatcaaggaagacatcctcactgataaactcaatgagaactcaact
ccagagaaaaccgatgtgacaccttccaccacatctccaccttcctatgatagtgtgacc
aagccagaaaaagaaaaatttgagaaagacaaatcagaaaaggaagacaaagggaaagat
atcagggaaagcaaaaagtaa
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