Sus scrofa (pig): 100518587
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Entry
100518587 CDS
T01009
Symbol
TOP1
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssc03032
]
100518587 (TOP1)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
100518587 (TOP1)
DNA replication proteins [BR:
ssc03032
]
Eukaryotic type
DNA Topoisomerases
100518587 (TOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
100518587
NCBI-ProteinID:
XP_020934054
Ensembl:
ENSSSCG00000007355
LinkDB
All DBs
Position
17:43710270..43799700
Genome browser
AA seq
769 aa
AA seq
DB search
MSGDHLHTDSQIEADFRLNDSHKHKDKHKDREHRHKEHKKDKEKDREKSKHSNSEHKDSE
KKHKEKEKTKHKDGSSEKHKDKHKDRDKEKRKEEKIRASGDAKIKKEKENGFSSPPRIKD
EPEDDGYFAPPKEDIKPLKRPRDEDDADYKPKKIKTEDIKKEKKRKLEEEEDGKLKKTKN
KDKDKDKKVPEPDSKKKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPE
SVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEEKNIITN
LSKCDFTQMSQYFKAQSEARKQMSKEEKLKIKEENEKLLKEYGFCIMDNHRERIANFKIE
PPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWLVSW
TENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRA
VALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFLGKDSIR
YYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKHLQDLMEGLTAKVFRTYNASI
TLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQTKIDAKKE
QLADARRDLKSAKADAKVLKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQIAL
GTSKLNYLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAIDMADEDYEF
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggaccatctccacaccgattcccagatcgaggcggatttccgactgaatgat
tctcataaacacaaagataaacataaagatcgagaacaccggcacaaagaacacaagaag
gacaaggagaaggaccgagaaaagtccaagcatagcaacagtgaacataaagattctgaa
aagaaacacaaagagaaggagaaaaccaaacacaaagatggaagttcagaaaagcataaa
gacaaacacaaagacagagataaggaaaaacgaaaggaagaaaagattagagcctctggg
gatgcaaaaataaaaaaggagaaggagaatggtttctctagtccaccacggattaaagat
gaacctgaagatgatggctactttgctcctcctaaagaggatataaagccattaaagaga
cctcgagacgaagatgatgctgattataagcctaagaaaattaaaacagaagatatcaag
aaagagaagaaacgcaaactggaggaagaagaggacggtaaattgaaaaaaaccaagaat
aaggataaagataaagataaaaaagttcctgagccagatagcaagaaaaagaagccgaag
aaagaagaggaacagaagtggaaatggtgggaagaagagcgctatcctgaaggcatcaag
tggaaattcctagaacataaaggtcctgtatttgctccaccatatgaacctcttccagag
agtgtcaagttttactatgatggtaaagtcatgaagctgagccccaaagcagaagaagta
gctacgttctttgcaaaaatgctcgaccatgaatatactactaaagaaatatttaggaaa
aatttctttaaagactggagaaaggaaatgaccaatgaagagaagaatattatcaccaac
ctaagcaaatgtgattttacccagatgagccagtatttcaaagcccagtcagaagctcgg
aaacagatgagcaaggaagagaaactgaaaatcaaagaagagaatgaaaaattactaaaa
gaatatggcttctgtattatggataaccacagagagaggattgccaacttcaagatagaa
cctcctggacttttccgtggccggggcaaccaccccaaaatgggcatgctaaagagacgg
atcatgcctgaggatataatcatcaactgtagcaaagatgccaaggttccttctcctccc
ccaggacataaatggaaagaggtccgacatgataacaaggttacttggctagtctcctgg
acagagaacatccaaggttccattaaatacatcatgctgaatcctagctcacggatcaag
ggtgagaaagactggcagaaatatgagactgctcggcggctgaagaagtgtgtggacaag
atccggaaccagtatagagaagactggaagtccaaagagatgaaagtccggcagagagct
gtagccctgtacttcattgacaagcttgctctgcgagcaggcaatgagaaggaggaagga
gaaaccgcggacactgtgggttgctgctcgcttcgtgtggagcacattaacctgcaccca
gagttggatggtcaggaatatgtggtagagtttgacttccttgggaaggactcaatcaga
tactataacaaagtccccgttgagaaacgagtttttaagaacttacagctatttatggag
aataaacagcctgaggatgatctttttgatagactcaatactggtattctaaataagcat
cttcaggatctcatggagggcttgacagccaaggtgttccgtacatacaacgcttccatc
acgctacaacagcagctaaaggaactcacagctcctgatgaaaacatcccagcaaagatc
ctatcttataaccgtgccaaccgagctgttgcaattctttgtaaccatcagagggcacca
ccaaaaacttttgagaagtccatgatgaacttgcagactaagattgatgccaagaaggaa
cagctagcagatgcgcggagagacctgaaaagtgctaaagctgatgccaaggtcctaaag
gatgcaaagaccaagaaggtggtagagtcaaagaaaaaggccgtgcagagactggaggag
cagctgatgaagctcgaagttcaggccacagaccgagaggaaaataaacaaattgctttg
ggaacctccaaactcaattatctggacccaaggatcaccgtggcttggtgcaagaaatgg
ggggtcccaattgagaaaatttacaacaaaacccagcgggagaagtttgcctgggccatc
gacatggctgacgaggactatgagttctag
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