Sus scrofa (pig): 100620677
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Entry
100620677 CDS
T01009
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03082
ATP-dependent chromatin remodeling
ssc03083
Polycomb repressive complex
ssc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100620677 (RBBP4)
03083 Polycomb repressive complex
100620677 (RBBP4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
100620677 (RBBP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100620677 (RBBP4)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
100620677 (RBBP4)
Histone modification proteins
HAT complexes
HATB complex
100620677 (RBBP4)
HDAC complexes
Sin3A-HDAC complex
100620677 (RBBP4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
100620677 (RBBP4)
PRC2.2
100620677 (RBBP4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
100620677 (RBBP4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100620677 (RBBP4)
Chromatin remodeling factors
NuRD complex
100620677 (RBBP4)
NuRF complex
100620677 (RBBP4)
NuRF complex (fruit fly)
100620677 (RBBP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
ANAPC4_WD40
eIF2A
MIOS_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
100620677
NCBI-ProteinID:
XP_013854580
Ensembl:
ENSSSCG00000028423
UniProt:
A0A8D2CA60
A0A5K1VU58
LinkDB
All DBs
Position
6:88987092..89006815
Genome browser
AA seq
425 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
EGQGS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaagcagcctttgatgacgcagtagaagaacgtgtgatcaacgaagag
tacaaaatatggaaaaagaacaccccttttctttacgatttggtgatgacccatgctctg
gagtggcccagcctaactgcacagtggcttccagatgtaaccagaccagaaggaaaggat
ttcagtattcatcgactggttttggggacacacacgtcggatgaacaaaaccaccttgtg
atagccagtgtgcagctccctaatgatgatgctcagtttgatgcttcacactatgacagt
gaaaaaggagaatttggaggttttggctcagttagtggaaaaattgaaatagaaatcaag
atcaaccatgaaggagaagtaaacagggcacgttatatgccccagaacccttgcatcatc
gcaacaaagactccatccagtgatgttcttgtctttgactatacaaaacacccttctaaa
ccagacccttctggagagtgcaacccagacttgcgtctccgtggacatcagaaggaaggc
tatggcctgtcttggaacccaaatctcagtgggcacttacttagtgcttcagatgaccat
actatctgcctgtgggacatcagtgcagttccaaaagaaggaaaagtggtggatgcgaag
accatctttacagggcatacggcagtagtagaagatgtctcctggcatctgctccacgaa
tctctgtttgggtcagttgctgatgatcagaaacttatgatctgggatactcgttcaaac
aacacttctaaaccaagccactcagttgatgctcacactgctgaagtgaactgcctttct
ttcaatccttatagtgagttcattcttgccacaggatcagctgacaagactgttgccttg
tgggatctgagaaatctgaaacttaagttgcattcctttgaatcacataaggatgagata
ttccaggttcagtggtcgcctcacaatgagactattttggcttctagtggtactgaccgc
agactgaatgtctgggatttgagtaaaattggagaggaacaatccccagaagatgcagaa
gatggaccaccggagttgttgtttattcatggtggtcacactgccaagatatctgatttc
tcctggaatcccaatgaaccttgggtgatttgttctgtatcagaagacaatatcatgcag
gtgtggcaaatggcggaaaacatttataatgatgaagaccctgaaggaagtgtggatcca
gagggacaagggtcctag
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