Sus scrofa (pig): 102157970
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Entry
102157970 CDS
T01009
Symbol
PELP1
Name
(RefSeq) LOW QUALITY PROTEIN: proline-, glutamic acid- and leucine-rich protein 1
KO
K16913
proline-, glutamic acid- and leucine-rich protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
102157970 (PELP1)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
102157970 (PELP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PELP1_HEAT
RIX1
Motif
Other DBs
NCBI-GeneID:
102157970
NCBI-ProteinID:
XP_020923449
Ensembl:
ENSSSCG00000017924
ENSSSCG00000020886
ENSSSCG00000028887
LinkDB
All DBs
Position
12:52177062..52229427
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AA seq
1128 aa
AA seq
DB search
MAAAVLSGPSAGSAAGVPGGTGGLSAVVSVPRLRLLLLDSVSGLLQPRAGSTVAPVHPPA
PSAPHLPGLMCLLRLHGTVGGAPNLSAVGALVGLSNARLGSIKTRFEGLCLLSLLVGESP
TEMFQQHCVSWLRSIQQVLQSQDPPPTMELAVAVLKDLLRYAAQLPTLFRDISMNHLPGL
LTSLLGLRPECELSALEGMKACMTYFPRACGSLKGKLASFFLSRVDALSPQLQQLACECY
SRLPSLGAGFSQGLKHTESWEQELHSLLASLHGLLGALYEGAETAPMQYEGPAVEALLSP
SEDGDAHVLLRLRQRFSGLARCLGLLLSSEFGAPVSVPVQEVLDVICRTLSVSARNISLL
GDGPLRLLLLPSLHLEALDLLSALILACGGRLLRFGALISRLLPQVLSAWSIGRDTLSPG
QERPYSTMRTKVYAVLELWVQVCGASAGVLQGGASGEALLTHLLSDISPPADALKLRSPR
GSPDGGLQTGKPSAPKKLKLDMGEPIAPPSHRKGDSNANSDVCAAALRGLSRTILMCGPL
IKEETHRRLHELVLPLVMGVQQGEVLGSSPYTSSRCRRELYRLLLALLLAPSPRCPPPLA
CALQAFSLGQREDSLEVSSFCSEALVTCAALTHPRVPTLQSMVPTCPTPAAVPPPEAPSP
FRAPAFHPPGPMPSAGPMPSXGPMPSAGPMPSVGPMPPARPGPPATANHLGLSGSSLVSV
PPRLLPGPENHRAGSNEEPVLAPSGTPPPTLPSDETFGGRVPRPAFVHYDKEEASDVEIS
LESDSDDSVVIVPEGLPPLPPPPPSGTTPPPVAPAGPPAASPPVPAKEEPEELPAAPGPL
PPPPPTPVPGPATLPPPQLVPEGTPGGGGAPALEEDLTVININSSDEEEEEEEEEEEEEE
EEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEDEEEEEEEELEEVE
ELEFGSAGAEVEEGGPPPPSLPPALPPAESPKVQPEPEPEPGLLLEVEEPGAEEAPGPET
APTLVPEALPAQGEAEREAGSPPTAPPPQELVEEEPSVPPTLLEEGAEGGGDKVPPPPET
SAAEEMETETESTALQEKEQDDTAAMLADFIDCPPDDEKPPPAAEPDS
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggttctcagcggaccctctgcgggctccgcggccggggttcccggcggg
accgggggtctctcggcggtggtctcggtcccgcgtcttcgcctgctgctgctggatagc
gtgtcggggttgctgcagccgcgagcgggatccaccgttgcccccgtgcatcccccagcc
ccctcggccccacacttgccggggctcatgtgcctattgcggctacatgggacggtgggc
ggggccccgaacctttcagctgttggggcattggtgggtctcagtaatgcccgtcttggt
tctatcaaaactcggtttgagggcctgtgtctgctgtccctgctggtgggggagagcccc
acggagatgttccagcagcactgtgtctcctggcttcggagcatccagcaggtcctgcag
tcccaggacccgccccccaccatggagttggccgtggctgtcctgaaggacctactccgc
tatgcggcccagcttcctacactcttccgggacatctccatgaaccacctccctggcctt
ctcacctccctgctgggcctcagaccggagtgtgaactctctgcactggaaggaatgaag
gcttgtatgacgtattttccccgggcgtgtggatctctcaaaggcaagctggcctcattt
ttcctgtctcgagtggatgccttgagccctcagctccagcagctggcctgtgagtgttat
tccaggctgccctctctgggagccggcttctcccagggcctgaagcacaccgagagctgg
gagcaggagctgcacagcctgctggcttccctgcacggcctgcttggggccctgtacgag
ggagcagaaacagctcccatgcagtacgaaggccctgcggtggaggcgctgctctccccc
tcggaggacggtgacgcccatgtccttctccggcttcggcagaggttttccgggctggcc
cgctgcctggggctcctgctcagctctgagtttggggcccctgtctctgtccccgtgcaa
gaagtcttggatgtcatctgccggaccctcagcgtcagtgccaggaacattagcctgctt
ggagatggtccgctgcggctgctgctgttgccctctctccacctcgaggccttggacctg
ctctctgcgctcatcctcgcgtgtggaggccggctcctgcgcttcggagccctcatcagc
cgcctgctcccccaggtcctcagtgcctggagcattggcagggataccctctctccgggc
caggagcggccttacagcaccatgcggaccaaggtgtatgctgtcctggagctgtgggtg
caggtgtgcggggcctcggccggagtgcttcagggcggggcctcgggagaggcgctgctc
acccacctgctcagtgacatctcccctccagctgatgccctcaagctgcgcagtccccgt
gggagccctgatgggggtttgcagaccgggaagcctagcgcccccaagaagctaaagctg
gacatgggtgagcccatagccccacccagccaccggaaaggggacagcaatgccaacagt
gacgtgtgtgcagctgcgctgagaggcctcagccgtaccatcctcatgtgcgggcctctc
atcaaggaggagacccacaggaggctgcacgagctggtcctccccctggtcatgggcgtc
cagcagggcgaggtcctgggcagctccccatacacgagctcccgctgtcgccgcgaactc
taccgcctgctgctggccctgctgctggcaccttctcctcgctgcccgcctcctctcgcc
tgtgccctgcaggctttctccctgggccagagagaagacagcttggaggtctcctctttc
tgctcagaagcactggtgacctgtgctgctctcactcacccccgggttcccaccctgcag
tccatggtccccacctgtcccacccctgccgcagttccccctcctgaggctccgtctcca
ttcagggctccggccttccatcccccgggccccatgccctcggcgggccccatgccctcg
ngcggccccatgccctcggcgggccccatgccctcggtgggccccatgcccccggcacgc
cctggacctccagccacagccaaccacctcggcctctctggctccagcttggtgtctgta
ccccctcgactccttcctggccctgagaaccaccgggcaggctcaaacgaagagcctgtc
cttgccccgagtggcactcctccacctactctaccctcagatgaaacttttggggggaga
gtgcccagaccagcctttgtccactatgacaaggaggaggcgtccgatgtggagatctcc
ttggaaagcgactctgatgacagtgtggtgatcgtgcccgaggggctgccacccctgccg
cccccacccccctcaggcaccacaccgccccctgtagccccagctgggccaccagcagcc
tcccctcctgtgccagccaaggaggagccagaagagctgcccgcagccccggggcctctc
cctccccctccgcccactcctgttcctggccctgcgaccctccctccgccccagttggtc
cctgaagggactcctggtggtggaggagccccagccctggaagaagacttgacagtcatt
aatatcaacagcagtgatgaggaggaggaggaggaagaagaggaagaggaggaagaagaa
gaggaagaggaggaggaggaagactttgaggaagaggaggaggatgaagaagagtatttt
gaagaagaggaggaagaggaagaagagttcgaggaggaatttgaggaagaggaaggtgag
ttagaggaagaggaagaggacgaggaggaggaagaggaggaagagttggaagaggtggaa
gagttggagtttggctcggcaggtgcggaggtagaagaaggggggcctcctcccccaagc
ctgcctccagctctgccccccgccgagtcccccaaggtgcagcctgagccagaaccagag
cccggcctgctgttggaagtggaggagccgggggccgaggaggcgcctgggcctgagacg
gcccccacattggtcccggaggcactccctgcacagggggaggcagagagggaagcgggg
agcccccccacagcaccacctccccaggagcttgtggaagaggagccctctgtgccccca
accctgttggaagagggggctgagggtgggggtgacaaggtgccacccccaccagagaca
tctgcagcagaagaaatggagacggagacagagtccacggctctccaggaaaaggagcag
gatgacacagctgccatgctggctgacttcattgattgcccccctgatgacgagaagcca
ccacctgccgcagagcctgattcctag
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