Sus scrofa (pig): 492313 Help Entry 492313            CDS       T01009                                  Symbol THBS1 Name (RefSeq) thrombospondin-1 precursor   KO K16857   thrombospondin 1 Organism ssc  Sus scrofa (pig) Pathway ssc04015   Rap1 signaling pathway ssc04115   p53 signaling pathway ssc04145   Phagosome ssc04148   Efferocytosis ssc04151   PI3K-Akt signaling pathway ssc04350   TGF-beta signaling pathway ssc04510   Focal adhesion ssc04512   ECM-receptor interaction ssc04820   Cytoskeleton in muscle cells ssc05144   Malaria ssc05165   Human papillomavirus infection ssc05205   Proteoglycans in cancer ssc05206   MicroRNAs in cancer ssc05219   Bladder cancer Brite KEGG Orthology (KO) [BR:ssc00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     492313 (THBS1)    04350 TGF-beta signaling pathway     492313 (THBS1)    04151 PI3K-Akt signaling pathway     492313 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     492313 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     492313 (THBS1)    04148 Efferocytosis     492313 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     492313 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     492313 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     492313 (THBS1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     492313 (THBS1)    05205 Proteoglycans in cancer     492313 (THBS1)   09162 Cancer: specific types    05219 Bladder cancer     492313 (THBS1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     492313 (THBS1)   09174 Infectious disease: parasitic    05144 Malaria     492313 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ssc04131]     492313 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ssc00536]     492313 (THBS1) Membrane trafficking [BR:ssc04131]  Endocytosis   Phagocytosis    Opsonins     492313 (THBS1) Glycosaminoglycan binding proteins [BR:ssc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    492313 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 cEGF TSP1_ADAMTS Laminin_G_3 Laminin_G_2 TSP1_CCN EGF Laminin_G_1 Motif Other DBs NCBI-GeneID:  492313 NCBI-ProteinID:  NP_001231465 Ensembl:  ENSSSCG00000004789 Vega:  OTTSUSG00000001735 UniProt:  A0A4X1URL0 Q5U903 F1SS26 LinkDB All DBs Position 1:complement(131728781..131746098) Genome browser AA seq 1170 aa AA seqDB search MGLAWGLSVLFLLHVCGSNRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLAVERKDHSGQVFSVV SNGKAGTLDLSLTVQGKQQVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD VPIQSIFTRDLASIANLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTNVLL TLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK VTEENKELASELRRPPLCYHNGVQYRNNEEWTVDSCTECRCQNSVTICKKVSCPIMPCSN ATVPDGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQT RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARE TKACQRDACPINGGWGPWSPWDICSVTCGGGVQRRSRLCNNPAPQFGGKDCVGDETENQI CNKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPPGYSGNGIQCEDVDECKEVPDACF NHNGEHRCKNTDPGYNCLPCPPRFTGSQPFGRSVEYATANKQVCKPRNPCTDGTHDCNKN AKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPN LPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN HNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEH NPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDN DGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENVDISETDFRRF QMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERDD DYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNAL WHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYD KTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt atggggctggcctggggactcagtgtcctgtttctgttgcatgtgtgtggctccaaccgc attccagagtctgggggagacaacagcgtctttgacatctttgaactcaccggggctgcc cgaaagggctctgggcgccgactagtgaagggtcctgacccttccagcccagctttccgc attgaggatgccaacctgatcccccctgtccctgatgacaagttccaagacctagtggat gctgtgcgagcagagaaaggtttcctcctcctggcctccctgaggcaaatgaagaagacc cggggcacgctgctggccgtggagcggaaagaccattctggccaggtcttcagcgtggtc tccaacggcaaggcgggcaccctggacctgagcctgaccgtgcaggggaagcagcaggtg gtgtcagtggaggaagccctcctggccactggtcagtggaagagcatcaccctatttgtg caggaggacagggcccagctgtacatcgactgcgagaagatggagaatgccgagctggac gttcccatccaaagcatcttcaccagggacctggccagcatcgccaatctccgcatcgca aaaggaggtgtcaatgacaattttcagggggtgctgcaaaacgtgaggtttgtctttgga accacaccagaagacatcctcaggaacaaaggttgctccagctctaccaatgtccttctc accctggacaacaatgtggtgaatgggtccagccccgccatccgcaccaactacattggc cacaagacgaaggatctgcaagccatctgcggcatctcctgtgatgagctgtccagcatg gtcctggagctcaggggcctgcgcaccattgtgaccacgctgcaggacagcatccgcaaa gtgactgaagagaacaaagagttggccagtgagctgaggaggccccccctctgctaccac aacggagtccagtataggaataacgaggagtggacagtggacagctgcactgagtgtcgt tgtcagaactcagttaccatctgcaaaaaagtgtcctgccccatcatgccctgctctaat gccacagttcctgatggagaatgctgccctcggtgttggcccagcgactctgctgacgat ggctggtccccatggtctgagtggacctcttgctctgtgacgtgtggcaatggcatccag cagcgtggccgctcctgtgacagcctcaacaacagatgcgagggctcctccgtgcagact cggacctgccacattcaggagtgtgacaagagatttaaacaggacggcggctggagccac tggtccccgtggtcgtcttgttctgtcacatgtggagatggtgtgatcacaaggatccgg ctctgcaactctcccagtccccaaatgaatgggaagccatgtgagggtgaagctcgggag accaaagcctgccagagagacgcctgccccatcaatggaggctggggaccctggtcacca tgggacatctgttccgtcacctgtggaggaggggtacagagacgtagccggctctgtaac aaccccgcaccccagtttggaggcaaggactgcgttggtgatgagacagaaaatcagatc tgcaacaagcaggactgtcccattgatggatgcctgtccaatccttgctttgctggtgcc aagtgtaccagctaccctgatggcagctggaagtgcggtgcttgtccccctggctacagt ggaaatggcatccagtgcgaagatgttgatgagtgcaaagaagtccctgatgcctgcttc aaccacaatggagagcacaggtgtaagaacacagatcccggctacaactgcctgccctgc ccaccacgtttcactggctcccagccctttggccgcagtgtggaatacgccaccgccaac aaacaggtgtgcaagccccgtaacccctgcacagatgggacgcatgactgtaacaagaat gccaagtgcaactacctcggccactacagcgacccgatgtaccgctgcgagtgtaagcct ggttacgcgggcaatggcatcatctgtggggaggacacggacctggacggctggcccaac gaggacctggtgtgcgtggccaatgcaacttaccactgcaaaaaggataattgccccaac cttcccaactcagggcaggaagactatgacaaggatggaatcggcgatgcctgcgatgat gacgatgacaatgataaaattccagatgacagggacaactgtccattccattacaaccca gcccagtacgactatgacagagatgatgtgggagaccgctgtgacaattgcccctacaac cacaacccagaccaggccgacacagacaacaatggggaaggagacgcctgcgcggctgac attgatggggatggtatcctcaacgaacgagacaactgccagtatgtctacaacgtggac cagagagacaccgacatggatggggttggcgatcagtgtgacaactgccccttggaacac aatccggatcagcttgactctgactcagaccgcattggagatacctgtgacaacaatcag gatattgatgaagatggccatcagaacaacctggacaactgtccctatgtgcccaacgcc aaccaggctgaccacgacaaggatggcaagggtgatgcctgcgaccatgacgacgacaat gatggcatccctgatgacagggacaactgccggcttgtgcccaatcctgaccagaaggat tctgatggggatggtcgaggtgatgcttgcaaagatgattttgaccatgacaatgtgcca gacatcgatgacatctgtcctgaaaatgttgacatcagtgagactgatttccgccgattc cagatgattcctctagatcccaaagggacatcccagaatgaccctaactgggttgtacgc catcagggtaaagaactcgtccagactgtcaactgtgaccctggacttgctgtaggttat gatgagtttaacgctgtggacttcagtggcacctttttcatcaacaccgaaagggatgat gactatgctggatttgtgtttggctaccagtccagcagccgtttctatgttgtgatgtgg aagcaagtcactcagtcttactgggacaccaatcccacaagggctcaggggtactcaggc ctttctgtgaaggttgtgaactccaccacagggcctggtgagcatcttcggaacgccctg tggcacacaggaaacacccccggccaggtgcgtaccctgtggcatgatcctcgtcacata ggctggaaagatttcactgcctacagatggcgtctcagtcacagaccaaagacaggtttc attcgtgtggtgatgtatgaagggaagaaaatcatggcagactcaggacccatctatgac aaaacctatgccggtggtaggctagggttgttcgtcttctctcaagaaatggtgttcttt tccgacctgaaatatgaatgcagagattcctaa

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