Staphylococcus schleiferi 1360-13: LH95_07285
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Entry
LH95_07285 CDS
T04012
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ssch
Staphylococcus schleiferi 1360-13
Pathway
ssch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LH95_07285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssch03019
]
LH95_07285
Messenger RNA biogenesis [BR:
ssch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LH95_07285
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
AKS67263
LinkDB
All DBs
Position
complement(1535108..1536667)
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AA seq
519 aa
AA seq
DB search
MNLLSLLLILLGIILGVVVGYLIAQNLIYQKQAQAKRTAKDIIEQANKEAENLKKEKLIE
AKEENQVLRERIESELRERRGELQRQESRLLQKEENLERKSDLLDKKDEILEQKESKLEE
RQQQVDAKESSVQSIIMKHEQELERISGLTQEEARKEQLERVEEELSQDIAVLVKEKERE
AKEKVNQKAKELLATTVQRFAADHTSESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIAKTALINLVSDGRIHPGRIEDMVEKARREVDEIIRD
AGEHATFELNIHNMHPDLIKILGRMHYRTSYGQNVLKHSIEVAYLSGMLAAELNEDVTLA
KRAGLLHDIGKAIDHEVEGSHVEIGVELAKKYGEPETVINAIHSHHGEVEPTSIISILVA
AADALSAARPGARKETLENYIKRLERLEDISESYDGVEKAFAIQAGREIRVIVSPEEIDD
LKSHRLARDIKNQIEDELQYPGHIKVTVVRETRAIEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattaagcctcttactcattttgctgggtataattctaggagttgttgtaggg
tatttaatcgcccagaatttaatatatcaaaagcaggcacaagccaaacgtactgctaaa
gatattattgaacaagcaaacaaagaagcagagaatcttaaaaaagagaaattaatcgaa
gctaaagaagaaaaccaagttctaagagagcgcatcgaaagcgaactaagggaacgacgt
ggagagcttcaaaggcaagaatcccgacttcttcaaaaagaggagaacttggagcgaaaa
tctgatctactcgataaaaaggatgagattttagagcaaaaagaatctaaacttgaagaa
agacaacaacaagtagacgcaaaagagagtagtgttcaatcaataataatgaagcacgaa
caagaattagaacgcatctccggtctcacacaagaagaagcacgtaaagagcaattggaa
cgtgtagaagaagagttgtcacaagatattgcagtacttgttaaagaaaaagagcgtgaa
gctaaagaaaaagtaaaccaaaaagcaaaagaattactcgctacgacagtgcaacgtttt
gctgctgatcatacttcagagtcaacagtgtcagttgttaacttacctaatgacgagatg
aaaggacgtatcatcggtcgtgaaggtagaaatattcgtacgttagaaacattaacgggt
attgatttaatcattgatgatacacctgaagcggtaattttatcaggttttgatcctatt
cgaagagaaatcgccaaaacagcgttaatcaaccttgtttctgacggtcgtattcatcca
gggcgtattgaagatatggtagaaaaagcaagacgagaagtcgatgaaattattcgtgat
gcaggtgaacatgcaacatttgaattaaatattcataatatgcatcctgatctcattaaa
attttagggcgtatgcattatcgaacaagttatggacaaaatgtgcttaaacattctatt
gaagtagcatatttatctggaatgctcgctgcagaattgaacgaagatgtaacactggct
aaaagagctggtttattacacgatattggtaaagcgattgatcacgaagttgaaggaagc
catgttgaaattggtgtcgaattagctaaaaaatatggcgagcctgagacggtcatcaat
gcaattcattcacaccatggagaggttgagccgacatcgattatatcaattttagtcgct
gctgcagatgctttatcagctgcaagacctggcgctagaaaagaaacgttagagaattat
attaaacgtttagaacgattagaggacatctctgaaagttatgatggcgtggaaaaagct
tttgctatacaagcgggtcgtgaaatacgcgtgattgtatcaccagaagaaatagatgat
ttaaaatctcatcgcttagcgagagatattaaaaatcagatcgaggatgaactacaatat
ccgggtcatatcaaagtgacagttgttcgtgagacgagagcaattgaatatgcgaagtaa
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