Staphylococcus schleiferi 1360-13: LH95_08020
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Entry
LH95_08020 CDS
T04012
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
ssch
Staphylococcus schleiferi 1360-13
Pathway
ssch03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LH95_08020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssch03400
]
LH95_08020
DNA repair and recombination proteins [BR:
ssch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LH95_08020
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
GIY_YIG_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AKS67396
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Position
complement(1691620..1693410)
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AA seq
596 aa
AA seq
DB search
MEDIKQHIRQKLSVLPMEPGCYLMKDRQDQVIYVGKAKKLRNRVRSYFTGAHDTKTTRLV
REIVDFEYIVTSSETESLLLELNLIKKYQPRYNVLLKDDKSYPFIKITKERHPKLIVTRT
VRKGSGKYFGPYPNAYSAHETKKLLDRIYPFRKCDKMPDRLCLYYHIGQCLGPCVYPVDQ
SEYERMTREITEFLNGEDKTILRNLEEKMQKASENLEFEQAKEYRDLIQHIHNLTKKQKI
MSADQTVRDVFGYSVNKGWMCIQVFFIRQGNLIEREATMFPLQQTPEEEFYTFIGQFYQL
NQHFLPREVHVPSNLDTTMIGLVVDTKIVSPQRGQKKQLVDMANKNAHIALDNKFELIAR
DESRTVKAIEQLGDAMGIQTPIRIEAFDNSNIQGVDPVSAMVSFVDGKPDKKGYRKYKIK
SVEGPDDYKSMQEAVRRRYTRVLNEGLPLPDLIIVDGGKGHMSSVASVLENELGLDIPIA
GLAKNDKHQTSELLYGETAQVIPLKKNSQAFYLLQRIQDEVHRFAITFHRQTRQKTGMQS
VLDQVEGIGPKRKTKLLRTFGSIRKMREASVNQLQEAGLPKNTAILLYETLNEQNE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggaggatataaagcagcatattaggcaaaaattgtctgtgttgcctatggagccgggt
tgttacttaatgaaagatcggcaagaccaagtgatttatgtaggcaaagcgaagaaatta
agaaatcgtgtccgttcttattttacaggtgcacatgatacgaaaacaacgcggcttgta
agagaaatagttgatttcgagtatattgtcacatcgagcgagacagagtcattgctattg
gaactaaatttgattaaaaagtatcaacctcgttataacgtattattaaaagatgataaa
agctacccctttattaaaataacaaaagagcgacatcctaaactaatcgtaacccgaaca
gttcgtaaaggaagcggaaaatattttgggccgtatcctaatgcttattctgcacatgag
acaaaaaaattattagatcgtatctatccatttcgtaaatgtgataaaatgccagatcgt
ttatgcctctattatcatattgggcaatgtttaggaccttgtgtgtatccggtagaccaa
tctgaatatgaaagaatgacaagggaaattaccgaatttttaaacggggaagataaaacg
attttaagaaatcttgaagaaaaaatgcaaaaagcaagtgagaatctagaatttgaacaa
gcgaaagaatatcgtgatttaattcaacacattcataatctaacgaaaaagcaaaaaatt
atgtcagccgatcaaacggttagagacgttttcggttatagcgtgaataaaggatggatg
tgtatccaagtctttttcattagacaaggtaatctgattgaaagagaagcaacgatgttt
ccattgcaacaaacccctgaagaagaattctatacatttattggtcagttctatcaatta
aatcaacatttcttacctagggaagttcacgttccttcaaatcttgatacgactatgatt
ggtttagtagtagatacaaaaatcgtttcgcctcagcgtggtcaaaaaaaacaacttgtt
gatatggcaaataaaaatgcacatattgcattagacaataaatttgagctcattgctaga
gatgaatctcgaacagtcaaagcaatcgaacaattgggcgatgcgatggggattcaaaca
cctattcgtatagaggcttttgataattcgaacatacaaggagttgatcccgtttctgca
atggtcagttttgtcgatggaaagccagataaaaaaggctatcgtaaatacaaaataaaa
tctgttgaaggcccagatgattataaatctatgcaagaagcagtgcgtcgtcgctataca
cgtgtgttaaatgaaggtttgcctcttccagacttgattattgttgacggagggaaaggc
cacatgtcgagtgtcgcaagtgtattagaaaatgagttgggcttagacattccaattgca
gggctcgctaaaaatgacaagcaccaaacttcagaattattgtatggagagaccgcacaa
gttattcctttgaagaaaaatagccaagctttctatttattgcaacgcatacaagatgaa
gtgcatcgttttgcgattactttccatcgtcaaacgagacaaaaaacaggcatgcaatcg
gtgctagatcaagtcgaaggtatcggtccaaaacgtaaaacaaaattattaagaacattt
ggttcgattagaaaaatgcgtgaagcaagtgtgaatcaacttcaagaagcaggactgcct
aaaaatactgcaattttactctatgaaacattaaatgagcaaaatgaatga
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