Sporothrix schenckii: SPSK_00840
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Entry
SPSK_00840 CDS
T05555
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ssck
Sporothrix schenckii
Pathway
ssck03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SPSK_00840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssck03021
]
SPSK_00840
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_00840
Transcription machinery [BR:
ssck03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SPSK_00840
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
SPSK_00840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
Cytomega_UL20A
Motif
Other DBs
NCBI-GeneID:
27663063
NCBI-ProteinID:
XP_016584244
UniProt:
A0A0F2LVT8
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MAAAVQRPGASAAPNESPLQAATNPSGRLAAGMLVRGAGSAPSHYAFAFTPFLQTTYKHG
LPADRPVCRAYSTTGSCPLGSRCPDRHLAPAAAAAAIAAGATYTPIGGSGSSQHHSGGRD
QGGFNSLVCKHWLRGLCKKGEGCEFLHEYNLRKMPECNFFLRNGYCSNGDECLYLHIDPR
SKLPPCPDYDNRGFCALGPTCPKKHVRRKAICPYFLAGFCPDGMRVCKEGAHPKWTSVAI
VAPQVAAEKAAAEAAAAEAALRGETLDESGQPGSPYAGGDDYSMGGTNDHLQHDTDSHNQ
HQNQYQHQYQHYGGADDASSIAGSDRTSRGDHRGGFRDRGRGGRWRGRGAGGRGFRGRGR
GDH
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccgtccagcggccaggcgcaagtgccgcgccgaacgagtcgcccttgcaa
gccgccaccaacccgtccggccgcctcgctgccggcatgcttgtccgcggcgccggcagt
gctccgtcccactacgcctttgctttcacgcccttcctccagaccacatacaaacacggc
ctgcccgccgaccgccccgtctgccgtgcctacagcactaccggatcctgtccgctgggc
tcgcgctgcccggaccgccacctcgcaccggccgcggccgctgccgcgattgctgccggc
gccacctacacgcccatcggcggatccggaagcagccagcaccacagcggcggccgcgac
cagggcggcttcaactccctcgtctgcaagcactggctgcgcggcctctgcaagaagggc
gagggctgcgagttcttgcacgagtacaacctgcgcaagatgcccgagtgcaacttcttt
ttgcgcaacggctactgcagcaacggcgacgagtgcctctacctccacatcgacccccgc
agcaaactgccgccctgcccagactacgacaaccgcggcttctgcgcgctgggccccacg
tgccccaagaagcacgtccgccgcaaggccatttgcccctactttttggccggcttctgc
cccgacggcatgcgcgtctgcaaagagggcgcgcaccccaagtggacgtccgtggcgatt
gtcgcgccgcaggtcgccgccgaaaaggcagcagccgaggctgcggcagccgaggcggcc
ctgcgcggcgagacgctcgacgagagcggccagcccgggtcaccgtatgccggaggcgac
gattacagcatgggcggcaccaacgaccacctccaacacgatacggacagccacaatcaa
caccagaaccagtaccaacaccaataccaacattatggcggtgccgacgatgccagcagt
attgcaggcagcgaccggacatcacggggcgaccaccgtggcgggttccgggaccgaggc
cgcggcggccgttggcgtggccgcggcgctggtgggcgtggtttccgtggacggggacga
ggggatcattaa
DBGET
integrated database retrieval system
