KEGG   Sporothrix schenckii: SPSK_07022Help
Entry
SPSK_07022        CDS       T05555                                 

Definition
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ssck  Sporothrix schenckii
Pathway
ssck03030  DNA replication
ssck03410  Base excision repair
ssck03420  Nucleotide excision repair
ssck03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPSK_07022
   03410 Base excision repair
    SPSK_07022
   03420 Nucleotide excision repair
    SPSK_07022
   03430 Mismatch repair
    SPSK_07022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssck03032]
    SPSK_07022
   03400 DNA repair and recombination proteins [BR:ssck03400]
    SPSK_07022
Enzymes [BR:ssck01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SPSK_07022
    6.5.1.6  DNA ligase (ATP or NAD+)
     SPSK_07022
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     SPSK_07022
DNA replication proteins [BR:ssck03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    SPSK_07022
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     SPSK_07022
DNA repair and recombination proteins [BR:ssck03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SPSK_07022
   NER (nucleotide excision repair)
    Other NER factors
     SPSK_07022
   MMR (mismatch excision repair)
    Other MMR factors
     SPSK_07022
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C NuDC
Motif
Other DBs
NCBI-GeneID: 27668969
NCBI-ProteinID: XP_016591461
UniProt: A0A0F2MIU8
LinkDB All DBs
Position
Unknown
AA seq 917 aa AA seqDB search
MPSPAKKRKLNAENAKGTQPRGLEYFFSKQRQTGSLSVPATISNEDETDVAASSSNGAEF
TGTEMTDEELARKLQAEWDEETRREQQSLPILTASEDVVPDVPDTGGPQQEAVSPLSPPP
PSSKNTLSLQSVTTAEDAVAALIPLDESPLVFEPSKYIPALKRQWAVAKPGGATSGDASY
ALLTRCFVLVNATQSRIKIVDTLVNCLRLLIEADPESLLPAVWLATNAISPPYISLELGL
GGSAIGKALKQVCGLDARSLRSLFHKYGDPGDVAFEAKKKQAFTLRRPQPLTIRGVYLSL
VKVANSQGPGSVEAKQRIVDRLLQDARGGDESRYIVRTLCQHLRIGAVKTTMLIALSRAF
LLSKPPQRDGAVDGFSYAALQDPKLLAAMKKEELAEVWARAEETVKACFARRPNYNDLVP
VLLEIGVTDELLLRCGLALHIPLRPMLGSITRDLGEMLGKLQGRAFTCEYKYDGQRAQVH
CDRDGKVSIFSRHLEVMTDKYPDLVSLVPRIRGEGVESFILEGEVVAVDRESGELRTFQA
LTNRARKDVAIGSITIDVCLFAFDLMFLNGQPLLDRPLRERRELLRSLFVEIPHHFTWVK
SMDATSEDGEAVSAFFKSATDAKCEGIMVKILDNLPDLAYTGDGDDEDDEAMARVVPPVA
PVKKKPKSKATANAAQNGGDNGAEKKTSGRRKPLLATYEPDKRLDSWLKVKKDYGSTFDT
LDLIPIAAWHGMGRKAKWWSPILMAVRNEETGSLEAVTKCISGFTDAFYKANRAFYDNGH
DGDADDGDDDHENEGKDGMGHGSTGEQETKKTNNTRTQKPSFVEYYGPEPDVWFEPQEVW
EMAFADITLSPVYTAAIGLVNESRGLSLRFPRFLRKREDKGIDEASTSEFLAGLYRKQDA
RAPDKAGDTFKDAEEEE
NT seq 2754 nt NT seq  +upstreamnt  +downstreamnt
atgccgagcccagcaaagaagagaaagctcaatgctgaaaatgcaaaaggcacacagcct
cggggtctggagtatttcttttccaagcagagacagacggggagcttaagcgttccagcg
actatcagcaacgaggatgaaaccgatgtcgcggcctcgtccagcaatggcgctgagttc
accggaacggagatgaccgacgaggagctcgccagaaagctccaagcagaatgggacgag
gagactaggcgagaacaacagagtctccccattttgacggcatcagaggacgtcgtaccg
gatgtacctgacactggggggccccaacaagaagctgtgtcgcctctatctccgccacct
ccgtcctcaaagaacacactctcgcttcagtccgtgacgaccgcagaggatgccgtggcg
gccctgatcccgctcgatgaaagtccgttggtctttgagccttccaagtacatcccggca
ttgaaaaggcagtgggcggtggcaaaaccaggcggcgcaaccagtggcgacgcttcctat
gcacttttgacgcgttgtttcgtcctcgtcaacgccacacagagccggatcaagattgtg
gatactttggtcaactgtcttcgtctcttgatcgaggcggatccggagagcttgttgcct
gccgtgtggctggccaccaacgccatcagtccaccatatatctcgctcgaacttggcctg
ggcggctctgccattggcaaggcactcaagcaggtgtgcggcctcgacgcacgcagcctc
aggtccctcttccataaatacggggaccccggcgatgttgcctttgaggccaagaagaag
caggcgttcaccctacgacggcctcaaccgctgacgatccgaggcgtctacctgtccctg
gtgaaagtggccaacagccagggccccggcagcgtggaggcgaagcagcgcatcgtcgac
cggctgctgcaggacgcacgaggcggcgatgagagccgctatattgtgcggacattgtgc
cagcatctgcgcattggtgcggtaaagacgacgatgctgattgcgctctcacgagccttt
ttgctctcaaagccacctcagcgtgatggtgctgtggacggcttttcttacgccgcgctg
caggacccaaaattgctcgccgcaatgaaaaaggaagagctagcggaagtttgggcccgc
gcagaagaaaccgtcaaggcatgctttgcgcggcggccaaactacaacgacttggtgccc
gtcctgctggagattggtgtcacggacgaactgctgctgcgctgcgggctggcgctgcac
attcccctgcggccgatgctggggtccatcacgcgtgacctgggcgagatgcttggcaaa
cttcaggggcgtgcgtttacttgcgagtacaaatatgacggtcaacgcgcacaggtgcat
tgtgatcgcgacggaaaagtgtccatcttttcacgtcatctcgaggtgatgacggacaag
tatcctgatctcgtatcattagtgccacgcatccgtggggagggcgtcgaaagcttcatt
ctcgagggtgaagtggtcgctgtggaccgcgaatcgggtgagttgcgtactttccaagcg
cttacgaaccgtgcacgaaaagatgtggccataggtagcatcaccattgacgtttgcttg
ttcgcttttgatcttatgttcctcaatggccagccgctgttggaccggcccttgcgtgaa
cggagggagttgttgcgatcactctttgtcgagatcccacaccattttacgtgggtgaaa
agcatggatgcgacgtccgaggatggtgaggcggtgtcagcctttttcaagagcgccacc
gatgccaagtgcgagggtatcatggtcaagattctggacaacttaccagatctggcttat
accggcgacggtgacgacgaggacgacgaagcaatggcgcgggtggtccctcctgtggca
cctgtgaagaaaaagccaaaatcaaaagcaactgccaatgctgcgcagaacggaggcgac
aacggcgccgaaaaaaagacaagcggccgtcggaaacctcttcttgccacatacgagccg
gacaagcggctcgactcgtggctcaaggtgaagaaggattacggctcgacgtttgacaca
ctcgatttgattccgatcgctgcatggcatggcatggggcgcaaggccaagtggtggtcg
ccaatcctcatggccgtgcggaacgaggagacgggttccttggaggccgtcacaaaatgc
atatcgggatttacggatgctttctataaagctaaccgggcgttttacgacaatgggcat
gacggtgacgcagatgatggcgatgacgaccatgagaatgaaggtaaggacggcatgggg
cacggatcaacaggcgaacaggagacgaagaagacaaacaatacgcgcacacaaaagccc
agctttgtcgaatactatggcccagaaccagacgtctggttcgagccacaagaagtgtgg
gagatggcgtttgcagatatcacactaagtccagtctacacagcggccattgggcttgtc
aacgagagtcgtggacttagccttcgcttcccgcgatttctacgcaagcgggaggacaaa
ggcatcgatgaagcgagcaccagcgagttccttgcaggtctctaccgaaagcaagatgct
cgtgctccagacaaggccggcgacacatttaaagacgccgaggaagaggaatag

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