KEGG   Shewanella sediminis: Ssed_1201
Entry
Ssed_1201         CDS       T00596                                 
Name
(GenBank) type IV pilin biogenesis protein, putative
  KO
K02674  type IV pilus assembly protein PilY1
Organism
sse  Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:sse00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sse02044]
    Ssed_1201
   02035 Bacterial motility proteins [BR:sse02035]
    Ssed_1201
Secretion system [BR:sse02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   Ssed_1201
Bacterial motility proteins [BR:sse02035]
 Pilus system
  Pilus assembly proteins
   Ssed_1201
SSDB
Motif
Pfam: Neisseria_PilC
Other DBs
NCBI-ProteinID: ABV35812
UniProt: A8FSI9
LinkDB
Position
1427962..1431537
AA seq 1191 aa
MFYKNCLCGVFTVLVILSSGTFADDTELYLIDSSVNTGKRPQVLFVFDNSGSMSTEDQNA
VSSYCSAADKASGGCNYAEGFGTYLEGYHGYINDKGIYWNAGGIDNTASMPVPEDPNESR
RFEVSNNNCNSAVTALNERGRYTGYIREFKSSGKSGEWFSLAENNGLNKAALVDCHEDIL
KPDPANPGSIIKGKNVTTFDDGYPINDKNMYTSGATDVDRLFSEANTDFGKGSPVTLYTP
HYLVWYQWVTKTEEGQNSGGTGTRLEVAKDALKTALTGLSIPIDAGLAVFNLNYPQEYEI
DGGRIVSAIKEMTPTNESTLISLINGMPAQTNTPLCETLYEAHQYFSGGAVTFGNKDRNG
QGYYKIDGYVPNNPPSIISSGSYTTPFKKCPDTAYIIYITDGAPTLDRAADGAIAGLTAS
AANAANYAPFTFTNTRGDEETSYMPALAAYMYNNDLVKGVKDASGVDNQQNVRLFTIGFS
DGADAAADLLEEAAFRGGNPRVNGVSKGYYVAKNGLDLVTAMDDALKSILSIDSSFTSPS
IASNNFDKTQTYNSAYFAMFLPGKGPRWSGNLKKLKVNGSGDIVGPGGTANAIDSNGNIA
STTCTFWNTCSGANNDGNKVTAGGVLPALRTALKNRKILTNSGNSLIDIDNLSTSTMYSL
LGSPIADSQSTAVREHLDWLYGVDVDDDDNNGSFSDTREDVMGDPLHSKPLAINFGPSTS
SLDVRILVGTNQGLVHMFKDSDKGSADYSVGVVTESWAFAPAELLSNIPELRENLPTGEH
SVYGMDLSPVAYTETDSSGKVNKAWVYLGMRRGGVSYYALNITNPDSPAFKWKIDSNTSG
LEELGQTWSEPVVTSISGVEGPVLIFGGGMASSDGAGEAVYIVNADTGEFIHKFTAAGMY
SVPNKVAVLDSNNDGITDRVYATDIGGNVWRMDLPSADKTSWSIFKFAAIGSGTAPDDRM
FFAEPTVAQTQINNIHSESGVLSYQNLPYDAVTVGTGNRTHPLDTVTNDMFYVFQDRDVV
TKTFSSDDIPAPLTLTDLYNVSTSAPSSESDNIAFGTKRGWYYNFAGSGEKSLSASLIFD
GKVYFTSFLPPVNTEVDLDAGICGFSGQGRLYVFDLHKGTRTSSQLYYEIGERVPDTPQI
VIPEPEEGEESIAYIIGVGKGECVDGECKGTVKLGSGLTTNRIYYHLDEKQ
NT seq 3576 nt   +upstreamnt  +downstreamnt
atgttttataagaattgtttatgtggtgtgtttaccgttttagtgattttgtcgtcaggc
acttttgcagacgatacagaactctatctgattgactcttcagttaataccggtaaacgt
ccgcaggtgttatttgtttttgataactccgggagtatgtcgacggaggatcaaaatgcg
gtgagctcttactgttctgcagccgataaagccagtggaggatgcaattatgcagaaggt
tttggtacctatttagaggggtaccacggctatataaacgataaggggatctattggaat
gccggtggaatcgataataccgctagtatgcctgtaccggaggaccccaacgaaagtcgt
cgttttgaggtgtcgaataataactgtaatagtgcagttacagcattaaatgagcgtggt
agatatacaggttatattagagaatttaagtccagcggcaagagcggggagtggttctca
ctggctgagaataacggtctcaataaggctgccttggttgactgccatgaagatattcta
aaacctgatcctgcaaacccagggagtatcattaaggggaagaatgtaacgacgttcgat
gatggttaccctataaatgacaaaaatatgtatacctccggagccacggacgtcgatcgt
ttgtttagcgaggctaatacagattttggtaaaggctcacctgttacgctatatacgccg
cattatttagtttggtatcagtgggtaacaaaaactgaagaggggcaaaatagtggtggc
acggggacaagactggaagttgcaaaggatgcgttgaagacagctttgaccggtttatct
atccctatagatgcgggtttggctgtgtttaatctgaattacccacaagagtatgaaatt
gatggtggaaggatcgtttctgctattaaagagatgacgccgaccaatgaaagtactctc
atctccctgataaacggtatgccggcacaaaccaatacaccgttatgtgaaaccttatat
gaagcccatcaatactttagtggtggggctgtgaccttcggtaataaagaccgtaatggg
caaggttattataaaattgatggttatgtaccaaataacccgccaagtattatcagttcg
gggagttatacaacaccttttaaaaagtgccccgataccgcctatatcatctatattaca
gacggtgccccaacgttagaccgggcggcggatggtgctatagctggcttaacggcttca
gctgccaatgctgccaactatgcgccttttacctttacgaatacgcgaggtgatgaagag
acaagttatatgcccgctctggcagcatatatgtataacaatgatttggttaaaggtgtg
aaagatgcgagtggtgtagataatcagcaaaacgtaagattatttaccatcggcttttct
gatggtgcagatgcggcggcggatctgcttgaggaagcggcattcagaggcggaaacccc
agagtaaatggagtatcgaagggctattacgttgctaaaaatggtctggacttagtcact
gcgatggatgatgctctgaagtctattctgtctattgactcatcttttacatcgcccagt
atcgccagtaacaactttgataaaacccaaacctacaactcagcctattttgcgatgttc
ctgcccggaaaaggtcctcgctggagtggaaaccttaaaaagctaaaggttaatggttcg
ggggatattgtcggccccggtggtacggctaatgcgatcgattcgaatggtaatattgct
tcgaccacctgtactttttggaatacctgttcgggggcaaacaatgatggtaataaagtc
actgccggcggtgtattacccgcattgagaacggcacttaaaaatagaaaaatattaact
aatagcggtaacagcttaatcgatattgataacttatcgacatcgactatgtattcactg
cttggtagccctattgcggactctcaatcgacagccgttcgagagcatctagactggctc
tatggtgtggatgtcgatgatgatgataataatggaagcttttccgataccagagaggat
gtgatgggagaccctctgcactctaaacctttggcaatcaactttggcccctcaacttca
agcttggatgttcggatccttgttggtaccaaccagggattagtccatatgtttaaagac
tcagataaaggaagtgcagattactctgttggagttgttacagagtcttgggcatttgct
cctgctgaactgctaagtaatattccggagttaagagaaaacctgccaacaggtgaacac
agtgtctatggcatggacttatcacccgttgcgtacacagaaacggattctagtggcaaa
gtcaataaagcgtgggtctatttggggatgcgcagaggtggtgtttcctattatgcgtta
aacattaccaatcctgatagccccgcatttaagtggaagatagactcaaatacgagtgga
ttagaggagcttgggcaaacctggtcagagcctgtggttacatctatatctggagtagag
gggccggtgctcatatttggtggcggtatggcttcatctgatggagctggagaagctgtg
tatattgtcaatgctgatactggtgaatttatccataagtttacagctgcaggtatgtat
agtgttccgaacaaggtggcagtgttagacagtaataatgatggtataactgacagagta
tatgcaacagacatcggcggtaatgtttggcgcatggatctaccttcagccgataaaact
agttggtcaatttttaaatttgcagctattggttcgggaacggcgcccgatgataggatg
ttttttgcagagcccacagtggcgcagactcaaatcaataatattcatagtgagagtgga
gtgttgtcttaccaaaaccttccttatgatgcggttacggttggtacgggaaatcgtact
cacccgttagatacagtaacaaacgatatgttttatgtatttcaagatagggatgtggtg
accaagacattttctagtgacgatattccagcacctttgacacttacagacctatataat
gtgtccacatcggctccatcatctgaaagtgataatattgccttcggtaccaagagaggc
tggtattataattttgcaggttcgggcgaaaagagcctttctgcgtctttgattttcgat
ggaaaagtgtattttacctccttcctgccaccagttaatactgaggttgatctggatgcc
ggaatttgtggtttctctggtcagggtagactttatgtatttgatctgcataaaggaacg
aggacgtccagtcagctttactatgaaattggtgagcgggttcctgatactccacagatt
gtcatccctgagcctgaagagggtgaagaatctatagcttacattataggtgtcggtaaa
ggggagtgtgtagatggggagtgtaagggaaccgtaaagttagggagtggactaacgact
aaccgaatttattatcatctggatgagaaacagtaa

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