Shewanella sediminis: Ssed_1207
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Entry
Ssed_1207 CDS
T00596
Name
(GenBank) Alanine racemase
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sse03000
]
Ssed_1207
Transcription factors [BR:
sse03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Ssed_1207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
ANF_receptor
HTH_26
Crp
TnsD
Motif
Other DBs
NCBI-ProteinID:
ABV35818
UniProt:
A8FSJ5
LinkDB
All DBs
Position
complement(1434292..1435311)
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AA seq
339 aa
AA seq
DB search
MKVTINDVAKYAGVSIKTVSRVTNNEPSVKQATIDKVNEAIEALNYQPNLAARNLAGTKS
YVIGFIYDNPNAYYVIDMQNGILSSCKDLGYELLIHPCNAKADNICEELTKMVKHARLAG
LVLTPPLSEDPKILAALDKIDANYVRIIAGANIDAKTGLAVLVNDKHGAVSITQHLIELG
HKNIAFLSGDQHHESTKERLAGFTEAMENNHLAIKKDNIIEGEYSFESGVKGAKELLKRD
DRPTAIVACNDEIAAGALFAARLEGMDIPNDISIVGFEDSPFSRQTWPKLTTVHQPNQKI
AQMATELLIANRRAQTSEDAKIFIPEPVIRDSSSHPAVK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcacaataaacgatgtagcaaaatatgcaggcgtctcaataaagacggtttcc
cgagtcaccaataatgaaccctctgtaaagcaggctaccattgataaagtcaatgaagcc
atcgaggcactaaattaccaacccaatttagcagcaagaaatttggcgggtacaaaatca
tatgtcatcggctttatttacgacaacccgaatgcttattatgtcattgatatgcaaaat
ggaatcctatcctcatgcaaagatctgggctatgagttattgattcatccatgtaacgct
aaagcagataacatctgtgaagagttaactaagatggtgaagcatgcaaggctcgcaggt
ttagtgttgacgccaccactatctgaagaccctaagattttggcagcattagataagata
gatgcaaattatgtacgtatcatagctggcgctaacatcgatgcaaagactggcttggca
gtgctggtgaacgataagcatggtgccgtttctattactcaacatctgattgaactcggt
cataaaaatatcgcttttctgagtggcgatcagcaccatgaatcaaccaaagagcgacta
gccggctttactgaagcgatggagaataatcaccttgccatcaagaaagacaatattatt
gaaggtgaatattcatttgagtccggtgtaaagggcgctaaagagctgttgaaaagagat
gacagacctacagccatcgtcgcctgtaacgatgaaattgcagccggagcattatttgca
gccaggcttgaagggatggatatacctaacgacatctctattgttggtttcgaagatagc
cctttctcgaggcagacatggccgaagctgacaacggttcatcagccaaaccagaagatt
gctcagatggcgaccgaactactgatcgccaatagacgtgcacaaacttctgaagatgca
aaaatatttataccggaaccagtgataagagactcctcgtcccatccggctgtaaaataa
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integrated database retrieval system
