KEGG   Shewanella sediminis: Ssed_1566
Entry
Ssed_1566         CDS       T00596                                 
Name
(GenBank) helicase C2
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
sse  Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:sse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sse03400]
    Ssed_1566
Enzymes [BR:sse01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Ssed_1566
DNA repair and recombination proteins [BR:sse03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Ssed_1566
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 ATG17_like
Other DBs
NCBI-ProteinID: ABV36177
UniProt: A8FTK4
LinkDB
Position
complement(1866578..1868656)
AA seq 692 aa
MRMLSADVKTQIRTIYKGIASALPDFRSRREQNYIVAEISKTLAGEYDKHRRIIVVEAGT
GIGKSLAYILGSIPLALASKKKVCIATATVALQEQLLHKDLPFFLAQSELDFTFGLVKGR
QRYVCLSKLEMLIGADNGTQMAMWQTKPDNSQVKQLQALLKDYHEGKWNGERDTLTSQLP
DYLWQQIACDKHSCHRQLASHRNCPFHKAREDIDNWDVLIANHSLLFADLELGGGVILPD
PEELYYIIDEAHHLPMVARDFSSAQSTLRGAIDWLDKIDKTSSKLQNQIKSNHIIAPAQA
MQDHVTDLTGLLNQIAHYCDSQTKRFDNPENRIRFEHGKLPEALMIQAENLATVSTTALK
QFNKMLVLLSEAIKDGDIPKHQSEQLLTETGFMLQRLENLQKLWKMMAKEDNPKGAPMAR
WIELITGKQTDYLFNASPIEVGFMLEKLLWDKAAGVVLCSATLRALNNFNHFTRQVGLSI
DDGSRYLALDSPFDFEQNATLFLPQMKTEPTDDSYTEELAEQILALIEGEQATLVLFASY
WQMEKVADLVENKIKTGLQLQGTASRQEILTNHKKRCDENEPSIIFGTGSFSEGLDLPGE
YLTNLIITKLPFAVPTSPVEQAHAEYIKIKGGNPFLQLTIPDASRKLIQSCGRLLRKEQD
YGRITILDRRLVSKRYGKSLLDALPPFRRVIE
NT seq 2079 nt   +upstreamnt  +downstreamnt
atgcgcatgttatctgctgacgtaaaaactcaaattcgtaccatatataaaggtattgct
tcggcgttacctgacttccgctccaggcgggaacaaaactatatcgtcgcagagatatct
aaaaccctggcgggtgaatacgataaacatagacgcatcatagtcgttgaagctggaacc
gggatcggaaagtctctggcttatatattaggctcgattccgcttgcgttagccagtaag
aagaaagtctgtattgccacggcaaccgtcgcccttcaggagcagcttttacacaaagat
ctgcccttctttctcgcgcaatctgaattagattttacgttcggtctggtaaaaggacgg
cagagatacgtctgtctgtctaaactcgagatgctcatcggcgccgacaacggcacccaa
atggcgatgtggcaaacaaagcctgacaatagtcaggtaaagcaactgcaagccctgtta
aaagactatcatgaagggaaatggaacggtgaacgcgataccttgacctcgcaactgccc
gactatttatggcagcagattgcctgcgacaaacacagttgtcatcgccaattggccagt
catcgaaattgcccatttcacaaagccagagaagatatcgacaactgggatgtactgata
gctaaccacagtctgctttttgccgacctggaattaggtggtggcgtcattcttcccgat
cccgaagagctctactacattatcgacgaagcccaccacctgcctatggtggctcgagac
ttctccagtgcccagtctacattaaggggcgccatagattggttagataaaatagataaa
accagtagcaagttacaaaatcaaataaagagtaaccatatcatcgccccagctcaggcg
atgcaagatcatgtaaccgatctaacaggcttattaaatcagatagcccactactgcgac
tctcaaactaagcgcttcgataaccctgaaaatcgtatccggttcgaacatggtaaattg
cccgaagccctaatgatacaagctgaaaacttagccaccgtttcgacaacggcactgaaa
cagtttaataagatgttggtattactcagtgaagcgattaaagatggtgatatccctaaa
catcaatctgagcaactgctaactgaaaccggcttcatgttgcaaagattagaaaaccta
cagaaactgtggaaaatgatggcgaaggaggataatcccaagggtgcccctatggcacgt
tggattgaactcatcacaggaaaacaaactgattacctgtttaacgcctctccaatcgaa
gtcggttttatgctggagaaattactctgggataaagcggctggggttgtactttgcagt
gcaacattacgggcgttgaataacttcaaccatttcacccgccaggtagggctctctatc
gatgatggcagccgttatctggccttagattctccattcgatttcgagcaaaatgccacc
ctcttcttgcctcaaatgaaaactgagcctaccgatgacagttatactgaagagcttgct
gaacagatcctggcattaattgaaggtgaacaagcgaccttagtgctattcgcttcctat
tggcagatggaaaaagtggcagatctcgttgaaaacaaaattaagacaggattacagtta
caaggtacagcatcgagacaagagatattaaccaatcacaagaagcgttgtgatgaaaac
gagccgagtattatttttgggaccgggagcttctcagaaggactcgatcttccgggtgaa
tatctgacgaatctgatcatcaccaagcttcctttcgctgtgcccacctctcccgtagag
caggcccatgccgaatacattaaaattaaaggcggtaatcccttcctacagctgacgatt
ccggatgcatcacgtaaactgatacaaagttgtggtagattactccgtaaagagcaagac
tatggccgcatcacgattttggacagacgtcttgtcagtaaacgctatggaaaatcatta
ctggatgctctacctccctttcgccgcgtaattgaatag

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