Shewanella sediminis: Ssed_3284
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Entry
Ssed_3284 CDS
T00596
Name
(GenBank) diguanylate cyclase/phosphodiesterase with GAF sensor
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
sse
Shewanella sediminis
Brite
Enzymes [BR:
sse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
Ssed_3284
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GFIT
Motif
Pfam:
EAL
GGDEF
GAF_2
Herpes_UL17
Motif
Other DBs
NCBI-ProteinID:
ABV37888
UniProt:
A8FYG5
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Position
3986440..3988377
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AA seq
645 aa
AA seq
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MMIKAAERHLQDEHLLDDISVNTTEICVPEDIFNSWQQTLDLISEIVDTPAVLIMRIHKN
DNKMEVFASSKSTGNPYRRYDNDNLGKGLYCETVIAQNCELHIPNALKDSDWDNNPDLKL
GMIAYCGLPLLWPDNTPFGTICMLDNKEHSYSQKFRHLLARFQEAVVTNLATLYQQEKLQ
HLNQLLETRVQLRTHELAELSTKLIREIENRTSAEFSLEYSKNYDELTGLPMRSGLIDSL
TQMLKQSKASETVTVLYFGLRKFKSINDSYGYLIGDQVLSQFSQRLKQYLDKDTLIARIA
GSEFVIARSHKKTASNDLELITKILDCCNAPFSLAGFTITIPSCMGIAQFPTDATTAEEL
LQKSSAAMSISKTEGVRYSFFNQDTQSSIEQRYQLESHLVDALNNQELYLNYQPLVCLKT
HRILGAEALLRWHNPVLGQVPPDKFINLAEHNGQIIEIGNFVLHSALAQAAHWQALQQSD
FRIAINISPLQFRAPNFAEHIADLLTLYQLPTTSLELEITEGILLQDEHLAHDSIKKLQA
QGIRISLDDFGTGYSSLSYLQKYSFNTLKIDRCFITNLEKNEQDRELTRAIIAMGKKLNL
HVIAEGVETQEQDRFIQSEDCDYGQGYLYGKPTSADEFESNYLTE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgatgattaaggccgcggaacggcatttacaagacgaacacctgcttgatgatatatcg
gtcaataccaccgagatatgcgtacccgaagatatcttcaatagctggcaacagacactg
gatctgatctctgagattgtagacaccccggccgtgctcatcatgcgaatacacaaaaat
gacaataagatggaggtgtttgcatcaagcaagagcaccggaaacccctaccgtcgctat
gacaacgataacttaggcaagggtctctactgcgaaacggttatcgcgcaaaattgtgag
ttgcatattcccaacgccttaaaagacagcgactgggataataacccggatctaaaactt
ggcatgatagcctactgtggcttacccctactctggcccgataacactcccttcggcacc
atatgtatgctcgacaataaggagcacagttacagccaaaaattcaggcacctgttagcc
agatttcaagaggcggtagtcaccaaccttgccaccctgtaccagcaagaaaagctgcaa
cacctgaatcaactcctggaaacgagggtgcaactcagaacccatgaactggccgaactc
agcacaaaacttatccgggagatagagaacagaacctcggcagaatttagcctcgaatac
tcaaaaaactatgatgaactcacgggactacctatgcgttccggcttgatcgactcgctc
actcagatgcttaaacagagcaaagcgagcgaaactgtcacggtactctatttcggtctg
cgtaaattcaaatcgattaacgacagttatggttacctcatcggcgatcaggttctttct
caattcagtcaaagattaaaacagtacttagataaagataccttaatcgcccgcattgcc
ggttctgaatttgtcatcgcccgctcccataagaaaaccgcaagcaatgatctggagctg
ataacaaaaatattagactgctgtaacgcccctttctctcttgctgggttcaccattacc
attccctcctgcatggggattgcccagttccccaccgacgcaacaacggcagaggagttg
ctacaaaaatccagcgctgcgatgagcataagtaaaaccgaaggagtccgttatagcttt
ttcaatcaagatactcagtccagtatagaacagcgctatcaactggagagccatctggtc
gatgcactcaataatcaagagctataccttaactatcaacctttagtctgcttaaagacc
catagaatactcggcgcagaggctctgctgagatggcataatccggtcttgggacaggtg
ccacccgacaagtttattaacttagccgagcataatggtcagatcatcgagataggtaac
ttcgtactccatagtgcacttgcacaggcagctcactggcaggccttacagcaaagtgac
tttagaattgccatcaacatatcaccactgcagttcagagcgcccaactttgccgagcat
atcgccgatctgcttactctgtaccagctacccaccacctcattagagctcgagatcact
gagggtatcttgttacaggatgaacacttagcccatgactcgatcaaaaagctacaagca
cagggaatacgtatctctctcgatgatttcggtaccgggtactcctcattaagttatctg
cagaaatactcatttaataccctgaagattgaccgctgctttattaccaacctagagaag
aatgagcaggacagagagctcacccgggccattatcgccatgggtaagaagcttaaccta
catgtgatcgccgaaggggttgagacacaggagcaagatcggtttatccagagtgaagac
tgtgattatggtcagggctatctctacggcaaaccgaccagtgccgatgagtttgagtca
aactacctgacagagtaa
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