KEGG   Shewanella sediminis: Ssed_3489Help
Entry
Ssed_3489         CDS       T00596                                 

Definition
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
sse  Shewanella sediminis
Pathway
sse00550  Peptidoglycan biosynthesis
sse01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sse00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Ssed_3489
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases [BR:sse01002]
    Ssed_3489
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sse01011]
    Ssed_3489
Enzymes [BR:sse01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Ssed_3489
Peptidases [BR:sse01002]
 Serine Peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   Ssed_3489
Peptidoglycan biosynthesis and degradation proteins [BR:sse01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   Ssed_3489
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 CytoC_RC Beta-lactamase Peptidase_S13
Motif
Other DBs
NCBI-ProteinID: ABV38093
UniProt: A8FZ20
LinkDB All DBs
Position
4247622..4248809
Genome map
AA seq 395 aa AA seqDB search
MRLIDMNFFNRPLKTLILATTVACSFAYAAPVVTPNAPTVAAKAFILMDYNTGQVIAEEN
AYESLNPASLTKMMTSYVIGHEIKVGNISPDDKVTISKKAWSKNFPDSSKMFIEVGKQVT
VDDLNHGIIIQSGNDACVAMAEHIAGTEDGFVDLMNSWSKQLGMEDSYFENSHGLDSENH
KTTAYDMALLGAALIRDVPEEYVLYKKKSFTYNSIKQYNRNGLLWDKSMNVDGIKTGHTS
GAGYNLVTSATKDGMRLVAVVMGTKSESARKAESKKILNYGFRFFETITPYKAGESFVTQ
QIWYGDKESVDLGVLTDTPITISRGQAKNLQANFELTKELTAPLAKGETVGRIFFQLNGK
DIAQFPLVTLQEVNEGSWFSKLMDYFKQMFSGWFS
NT seq 1188 nt NT seq  +upstreamnt  +downstreamnt
atgcgccttattgatatgaatttttttaatcgccctttaaaaacacttatccttgcgacc
acggtcgcttgttctttcgcttatgccgccccggtcgttacccccaacgcaccaacagtt
gccgcaaaagccttcatcttaatggattacaatactggacaagtcatagcagaagaaaat
gcctatgaaagcttaaacccagcaagtttgaccaagatgatgaccagttatgttattggt
catgaaattaaggtcggaaatatctcacctgacgataaagtcactatcagtaagaaagcc
tggtcgaaaaacttcccagactcttcgaaaatgtttatcgaagtgggtaagcaagttact
gtcgatgatctcaatcatggcatcatcatccaatcaggtaacgatgcatgtgttgccatg
gcagagcatattgctggtacagaagatggcttcgtcgatctgatgaactcatggtcaaag
caacttggcatggaagacagctattttgaaaactctcatggtctggattctgagaaccac
aaaactacagcctacgatatggcgcttttaggtgcagcacttatccgtgatgtacctgaa
gaatatgtattatataaaaagaaatctttcacttacaacagtatcaaacagtataaccgt
aatggactgctgtgggataagagtatgaatgtcgacggcattaagaccggtcatacgtct
ggtgctggttacaacttagtcacttctgcaactaaggatggcatgcgtttagttgcagtt
gtaatgggcacaaaaagtgagtcagctcgtaaagctgaaagcaaaaaaattctaaactat
ggattccgcttcttcgaaactattactccttataaagcaggcgaaagcttcgttactcaa
cagatctggtacggtgataaagagtctgtagacttaggtgtactcacagacacaccaatc
acgatcagccgcggtcaggctaaaaacctacaggcaaacttcgagttaactaaagagctt
acggctccattagccaagggcgaaactgtcggacggatcttcttccagcttaacggtaaa
gatattgctcaattcccgcttgtaacactgcaggaagttaatgagggaagttggtttagc
aagttaatggattacttcaagcagatgttctcaggctggttcagctaa

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