Shewanella sediminis: Ssed_3695
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Entry
Ssed_3695 CDS
T00596
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
sse
Shewanella sediminis
Pathway
sse00061
Fatty acid biosynthesis
sse00071
Fatty acid degradation
sse01100
Metabolic pathways
sse01212
Fatty acid metabolism
sse02024
Quorum sensing
Module
sse_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Ssed_3695
00071 Fatty acid degradation
Ssed_3695
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ssed_3695
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sse01004
]
Ssed_3695
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sse04147
]
Ssed_3695
Enzymes [BR:
sse01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Ssed_3695
Lipid biosynthesis proteins [BR:
sse01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Ssed_3695
Exosome [BR:
sse04147
]
Exosomal proteins
Exosomal proteins of breast milk
Ssed_3695
Exosomal proteins of breast cancer cells
Ssed_3695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABV38299
UniProt:
A8FZM6
LinkDB
All DBs
Position
4498134..4499738
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AA seq
534 aa
AA seq
DB search
MAYDSDVKLDLTKYTSLIDLIEQAATRYGDKTAYACLGHHTSFSEIERDSRYFAAYLQNH
TALEVGDRVAIQLPNITQFVIAAYGAIRAGMVLVNTNPLYTERELTHQFNDSGAKVVVIL
SDLLPTLTNVVANTGIETVISTHALDLISPQAQPEVPFDTTLFNDVLAKGEQSPFNRITS
QIDKLAALQYTGGTTGLSKGAMLSHSNLIANAMQIKSRLGEKLVEGEEIFVAPLPVYHIY
AFMVNLVLYFERGCCSVLIPNPRDISSLIATLSKYPFTGFAGLNTLFVGLCHQPEFKALD
FSHLKITISGGTALTQAAANVWQQTTGCTISEGYGLSETSPVVSLNAPGHEQLGTIGKPV
LETEVKILDNDANEVPLGERGELAVRGPQVMGGYWNNTGDTANVMTKDGFFKTGDIAIET
ADGFHKIVDRKKDMIIVSGFNVYPNEVEEVLASHDAVLECAVVGIDNERSGEAVKAVIVL
ANNEADTIEVESTILAYCREQLTAYKIPKIVEFVPMLPKSTVGKILRRELRKGV
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcatatgattcagatgtgaaacttgacctcacaaaatacacctctcttatcgacctg
attgagcaggccgccacccgttacggtgacaagactgcctatgcctgccttgggcatcac
acctctttttctgaaattgagcgcgactcacgctattttgccgcttatctgcaaaatcat
accgctttggaagtgggcgatcgcgtcgcaatacaactgccaaatattactcagttcgtt
atcgccgcctatggtgccatcagggccggcatggtgctggttaacaccaaccccttgtac
accgaacgtgagctgacccatcagtttaatgattccggggctaaggttgtggttatccta
tccgacctgctaccgactctcaccaatgttgtcgccaataccggcatcgaaaccgtcata
tccacccatgccttagacctgatatccccgcaggcgcaacccgaggtcccctttgatacc
accttgtttaatgacgtattggcaaagggagagcaatcaccatttaaccggatcacaagc
caaatagataaactggcagcgctgcagtacacaggaggcacgaccgggttatctaaggga
gccatgctgagccacagcaacttaatcgctaacgcgatgcagattaaatctcgtttaggg
gagaagcttgtagagggcgaagagatatttgtcgcgccgcttcccgtctaccatatctac
gccttcatggtgaatctggtgctctatttcgagcgtggctgctgctcggtattgatcccc
aacccgagagatatctcatcactaatcgctaccctctctaaatatccatttaccggcttt
gcaggtctcaacaccctcttcgtcggtctctgccatcaacctgaatttaaggcgttagac
ttcagtcatctgaaaattaccatctccggcgggaccgccctgacacaggccgcagccaat
gtctggcaacaaaccacgggatgcaccatctccgaaggctacggcttatctgaaacatca
cccgtcgtctcactcaatgctcccggacatgaacagctgggcaccatcggtaagccggtg
ctggaaactgaggtaaagatcctcgataacgatgccaacgaagtgccattgggtgaacgt
ggtgagctggcagtgagaggccctcaggtgatgggcggctattggaacaatacgggcgac
accgcaaatgtgatgaccaaagatggcttctttaaaaccggcgatatcgccatagagacg
gcagacggttttcataagatcgtcgaccgtaagaaagacatgatcattgtttccggtttt
aacgtctaccctaacgaggtggaggaggttctggccagccacgacgccgtactcgaatgt
gccgttgttggcatagacaacgaacgcagtggtgaagcggtgaaggccgtcatcgtactc
gccaataatgaggcggacaccatcgaggtggagtcaaccatcttggcctactgccgtgaa
cagttaaccgcttataagatccctaagatagtcgagtttgtacctatgctgccaaaatct
accgtaggtaagatcctgcgaagagagttgaggaaaggcgtgtag
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