Shewanella sediminis: Ssed_3877
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Entry
Ssed_3877 CDS
T00596
Name
(GenBank) Succinate dehydrogenase
KO
K26318
fumarate reductase (cytochrome) [EC:
1.3.2.4
]
Organism
sse
Shewanella sediminis
Pathway
sse00020
Citrate cycle (TCA cycle)
sse00620
Pyruvate metabolism
sse00650
Butanoate metabolism
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ssed_3877
00620 Pyruvate metabolism
Ssed_3877
00650 Butanoate metabolism
Ssed_3877
Enzymes [BR:
sse01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.2 With a cytochrome as acceptor
1.3.2.4 fumarate reductase (cytochrome)
Ssed_3877
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Cytochrom_c3_2
FAD_oxidored
Pyr_redox_2
DAO
HI0933_like
FAD_binding_3
NAD_binding_8
Thi4
GIDA
Pyr_redox
Paired_CXXCH_1
SAM_MT
Cytochrome_C7
Motif
Other DBs
NCBI-ProteinID:
ABV38481
UniProt:
A8G058
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Position
complement(4730169..4731959)
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AA seq
596 aa
AA seq
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MKNFKKAICLATLIGSAGMVANATAADNLADFHAENQECDSCHTPDGELSNDSLTYENEQ
CVSCHGSMEEVAEETVHEHYNAHDSHFPGEIACTSCHSAHEKSMVYCDSCHSFDFDMPYV
GKWERHEPSIAELAKDKSEREAALALAPKDTVDVVVVGSGGAGFSASVSAHDHGAKVILI
EKEPVIGGNAKLAAGGMNAAWTDQQKAKGIEDSLELMTKDTMKGGRNINDPALVDVLVSH
SKGSVDWMTAMGADLSDVGRMGGASVNRTHRPTGGAGVGAHVVQVLYDNAVKRDIDMRMN
TRGIEILKDDSGNVKGLLVKGMYKGYYWIKADAVILATGGFAKNNERVSKLDPKLKGFVS
TNQPGATGDGIDVAGNAGAAMVDLQYIQAHPTLSVKGGVMVTEAVRGNGAILVNREGKRF
VNEITTRDKAAAAILQQTGKSAYLIFDDSVRKSLKKIDKYIGLGVAPTADTLVKLGKLEN
IDGKALTETVARYNTFVTSGKDADFERPNLPRAINEGNYYAIEVTPGVHHTMGGVMIDSK
AEVMNAKKQIIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEQAAAYSKKK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactttaaaaaagctatatgcctggccaccttaattggttctgcagggatggta
gcgaacgcaactgctgctgataaccttgccgattttcatgctgaaaatcaagagtgtgat
agctgtcatacaccggatggtgaactatctaacgatagccttacttatgaaaatgagcag
tgtgtttcttgtcacggctccatggaagaggtcgctgaagagacggtacatgagcattac
aatgcccatgattctcacttcccaggagagatcgcttgtacctcttgtcacagcgcccat
gaaaaatctatggtctattgtgattcttgccacagcttcgacttcgatatgccgtatgta
ggcaagtgggaacgtcacgagccaagcattgcagaacttgctaaagataaatctgagcgt
gaagcggcattagccctcgcaccaaaagatactgtcgatgtggtcgttgtcggttctggc
ggagcaggtttctctgcgtctgtttcagcccacgatcatggcgcaaaagtgattcttatc
gagaaagagcctgttatcggtggtaatgcaaaacttgcagccggtggtatgaatgccgcc
tggaccgatcagcaaaaagctaaaggcatcgaagatagccttgagttgatgactaaagac
accatgaaaggtggccgtaacatcaacgacccagcgttggtagacgttctggtttctcac
tcaaaaggttctgtcgattggatgacagccatgggtgcagacctgagtgatgtcggtcgt
atgggtggcgcatcggttaaccgtactcaccgtccaacgggtggtgctggtgttggcgca
cacgttgtccaggtgctttatgataacgccgttaagcgtgatatcgatatgcgtatgaat
acacgtggtatcgaaatccttaaagatgactcaggtaacgttaaaggcctgctagttaag
ggcatgtacaaaggctactactggattaaggccgatgccgttattctggctaccggtggt
ttcgctaagaacaatgagcgtgtttctaagcttgatcctaaactgaaaggctttgtatcg
actaaccaacctggtgcaacaggtgatggtatcgatgtagccggtaacgccggcgcggca
atggtagaccttcagtacatccaggctcacccaacactttctgtgaaaggtggtgtgatg
gtaactgaagcggtacgtggtaacggtgcaattttggttaaccgtgaaggtaagcgtttc
gtcaacgagatcacgactcgtgataaagccgctgctgcgattttacaacaaacaggcaaa
tcagcttacttgattttcgatgattcagtacgtaagtcactgaagaaaattgataagtat
attggtctaggcgtcgctcctactgccgatacgcttgttaagctaggtaagctggagaat
atcgatggtaaggctctgactgaaaccgttgctcgttataatactttcgttaccagtggt
aaagatgccgatttcgagcgtccaaacctgcctcgtgcaatcaatgaaggtaactactac
gctatcgaagtgactccaggtgttcaccacactatgggtggtgtgatgattgattctaaa
gcagaagttatgaatgctaagaagcagatcatccctggcctatatggcgctggtgaagtg
accggtggtgttcacggtgctaaccgcttaggtggtaatgctatctctgatatcatcacc
ttcggtagattagccggtgaacaagcggcggcttactctaagaagaaatag
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