Shewanella sediminis: Ssed_3895
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Entry
Ssed_3895 CDS
T00596
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
3.6.4.13
]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Ssed_3895
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GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
ResIII
DUF5900
AAA_30
TagF_N
Motif
Other DBs
NCBI-ProteinID:
ABV38499
UniProt:
A8G076
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Position
complement(4762715..4765282)
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AA seq
855 aa
AA seq
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MCNSDVISLEQLPVHSLLNPLRRAFGQHNQVILEAPTGAGKSTALPLAMLDWSEIKGKIL
MLEPRRVAARSVAHYIASQRGCAIGEEIGFRVRGESRSRATTKLEIVTEGILTRMIQQDP
ELEGIGLIIFDEIHERHLTTDLGLALALEIQGTFREDLKILAMSATLSGLPLHRVMPEAI
SLKSEGRSFPVDIAYNAASASKNRSQHQSHSHWIEHMGRSILDLLKNDNALVDDTSKGSL
LAFLPGQGEIMRLHDFLASRLDLNQFSLCPLYGSLPAKAQDRAIAAADDGKRKIVLSTNV
AESSLTIEGITMVVDSGYKRQASFNPRTGVTKLSLKRISQASAAQRSGRAGRLVPGHSLR
LWSQEEQGRLLKADEPEILHTDLIPMVHDGACWGVKSLSELPLLTQPSKANESVAWQLLQ
MLDVVDERRKITTHGRQAYELGCHPRLAHMLLKAKSLSTKTGSNELAGLACLLAGVLESR
SRSRHGTDIGNYLREAGQGESGQQVRLWMKKLKVTMPLSEIVAGAASSDIAFLLALAFPD
RIAKSRGVSGYQLANGTGVILPDNDPLSHVDWLVVADFQESEGRTSGRVYLAAEIDSAAF
KEQLSFLVSTKDYCGWDESKGRFFAETQRCIGQIVLSKTASKKPDPEQIKAAIIEQLLAK
GLGLLNMDDKWLQLQNRVKLAAALDGEHGWPDFGNASLLASLNDWLSPYLNDVRSLSQLK
ALDCYTLLLNLLGWDRQRRLDTLFPCHWPMATGTKAKITYDDAGRALLSVRLQEALGMAQ
SPVLANGRLIVTMELLSPARRPLALTADLASFWQGPYVEVKKEMKGRYPKHLWPDDPANT
LPTRFTKKKTLSAKS
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtaattcagatgtcatctccttggaacagttacccgtacatagcctgctcaaccct
ctgcgtagggcttttggtcagcataatcaagtcattctcgaagctcctaccggcgcaggt
aaatctactgcactgcctttggccatgctcgattggtcagagataaaaggtaagatattg
atgctggagcccagacgtgtggcggcgagaagtgtggctcactatattgcgagccagcga
ggctgtgctatcggtgaagagataggcttcagggtccgaggggagtcacgcagcagggcg
acgactaagctggagatcgtcaccgaaggtattttgacccgaatgatccagcaagatccc
gagttagaggggatagggttgatcatcttcgatgagatccatgaacgccacctgaccaca
gatctcgggctggctttggcccttgaaatccagggaacgtttcgggaagatcttaagatc
ttagccatgtcggcgacgctttcgggtctgccactgcacagagtcatgcccgaggccatc
tccctgaagagcgaggggcgcagctttcctgtcgatatcgcctataacgccgcttccgct
tcgaaaaacagatcccaacatcagtcccactcccattggatagagcacatggggcgaagc
atactggacttgctcaagaacgataatgccttggttgatgacacatctaaaggctcactg
cttgcatttctgcccggccagggggagatcatgcgcttgcacgacttcttagcgagccga
ttggatttgaatcaattctcactctgtccgctctacggtagtttacccgcaaaggcgcaa
gatagagccatagccgcagcagacgatggtaaacgtaaaatagtgctctcaaccaatgtg
gccgagtcgagtctgaccatcgaagggatcactatggtggtcgacagtggatataagcgg
caggccagctttaaccccagaacgggtgtgaccaaactgtcactcaaacgtatcagccaa
gcttcagctgcccagcgtagcggtcgtgcggggcgtttggttccggggcactctctgcgc
ctctggagtcaggaggagcagggcaggctattaaaggccgatgagcccgagatcctgcat
accgatcttattcctatggtgcacgacggagcgtgttggggagtgaagtcactctcagag
cttcccctgttaactcagccctcaaaggcaaatgaatcggtagcctggcagttactacag
atgctcgacgtggtcgatgaacgcagaaaaattacgactcatggaaggcaagcctacgag
ttaggctgtcatcccaggttggcgcatatgttactcaaggccaagtctctatcgacaaag
accggatcaaatgaactcgcgggcttagcctgcttattggccggtgtcttagagtctcgc
tcccgctcccgtcacggcaccgatattggcaattatttaagagaggccggtcaaggggaa
tctggtcagcaggtacgcttatggatgaaaaaacttaaggttactatgcctttgtctgag
attgttgccggcgccgccagctctgatatcgctttcctgctcgcgttagcgtttcccgat
cgtatcgcgaaaagccggggagtgtcgggttatcaactggccaacggtaccggggtgatc
ctgcccgataacgatcctctctctcatgtggattggctggtggttgcagattttcaggag
agtgaaggcagaacgtccggccgggtttaccttgccgccgagattgacagtgcggcgttt
aaggagcagctctcatttttagtgtcgaccaaagactattgtggctgggatgagtcgaaa
ggacgcttcttcgccgagactcagagatgtatcggtcagatagtgctgagcaagacagca
tctaagaagcctgatccggaacagataaaagccgccatcatcgaacagctcctcgctaag
gggctgggtctgctcaatatggatgataagtggttgcagctacaaaacagggtgaagcta
gcggcagcactcgacggcgagcatggctggcccgactttggtaatgccagcctgctggca
agtctcaatgattggttgagtccctatttaaatgatgtcagaagcttgtcacaactgaag
gctctcgactgttatactctgctgctcaatctcctcggatgggatagacagcgcaggctg
gatacgctgtttccttgccactggccgatggcgacgggtacgaaggcgaagataacttat
gatgacgcaggcagagccctgctcagtgtcaggctgcaagaggcgctgggaatggcacaa
agcccggttttggccaatggcagactcatagtgacgatggagttgctatctccggcccga
agacccttggcgttaacggccgatcttgccagtttttggcaaggaccctatgtcgaggta
aaaaaagagatgaaaggaaggtatcccaaacacctttggcccgacgatcctgccaatacc
ttaccgactcgttttaccaagaaaaagacgttaagcgcaaagagttag
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