Streptomyces alfalfae: A7J05_16630
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Entry
A7J05_16630 CDS
T05110
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssia
Streptomyces alfalfae
Brite
KEGG Orthology (KO) [BR:
ssia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssia03032
]
A7J05_16630
03400 DNA repair and recombination proteins [BR:
ssia03400
]
A7J05_16630
Enzymes [BR:
ssia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A7J05_16630
DNA replication proteins [BR:
ssia03032
]
Prokaryotic type
DNA Topoisomerases
A7J05_16630
DNA repair and recombination proteins [BR:
ssia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A7J05_16630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
APY87141
UniProt:
A0A1P8THM0
LinkDB
All DBs
Position
complement(4043860..4046706)
Genome browser
AA seq
948 aa
AA seq
DB search
MSPTSETAQGGRRLVIVESPAKAKTIKSYLGPGYVVEASVGHIRDLPNGAAEVPEKYTGE
VRRLGVDVEHDFQPIYVVNADKKAQVKKLKDLLKDSDELFLATDEDREGEAIAWHLLEVL
KPKVPVHRMVFHEITKDAIRSAVANPRELNKRMVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFGTGRAGDASDPSQLVARLTTVD
GKRIAQGRDFTSVGQLKANSAGTLHLDEANARALAAALENTAFSVRSVESKPYRRSPYAP
FRTTTMQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSDTAVTAARAQVTQLY
GSDYLPDKPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFRLYELIWKRTVASQ
MKDATGNSVTVKIGGRASDGRDAEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLP
QVAEGDALSADEISVDGHATKPPARYTEASLVKELEEREIGRPSTYASILGTILDRGYVF
KKGTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAQAVPWLRRFYFGE
GEGSGSAAEAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGDGIVLRVGRYGPYIERGE
RDSENHQRADVPEDLAPDELTVEYAEELLAKPSGDFELGTDPQSGHQIIAKDGRYGPYVT
EVLPEGTPKTGKNAVKPRTASLFKSMSLDTVTLEDALKLMSLPRVVGADAEGVEITAQNG
RYGPYLKKGTDSRSIDSEEQLFTITLEEALEIYSKPKQRGRAAAKPPLKELGEDPVSGKP
VVVKDGRFGAYVTDGETNATLRAADSVEEITPERGYELLAEKRAKGPAKKTAKKAPAKKA
TAKKTAAKKTTAKKTAAKKTTATAKKTAAKKTTAKKTAASAKSAASES
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcacagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagagctacctcggccccggctacgtagtcgaggcgagcgtc
gggcacatccgtgacctccccaacggcgccgcggaggtgcccgagaagtacaccggcgag
gtgcgccgcctcggcgtggacgtcgagcacgacttccagcccatctatgtcgtcaacgcc
gacaagaaggcacaggtcaagaagctcaaggacctgctgaaggactccgacgaactcttc
ctcgccaccgatgaggaccgcgagggcgaagccatcgcgtggcacctcttggaggtcctg
aagcccaaggtccccgtccaccggatggtcttccacgagatcaccaaggacgcgatccgc
agcgccgtcgccaacccgcgcgagctgaacaagcgcatggtcgacgcccaggagacccgc
cgcatcctcgaccgtctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccgcgcctgtcggcgggccgtgtccagtccgtggccacccgcctcgtcgtcgagcgggag
cgcgagcgcatcgccttccgctccgccgagtactgggacctgaccggcaccttcggcacc
ggccgcgccggtgacgcctccgacccctcgcagctcgtcgcccgcctcaccacggtcgac
ggcaagcgcatcgcccagggccgcgacttcacctccgtcgggcagctcaaggccaacagc
gcgggcaccctgcacctggacgaggccaacgcccgcgcgctggccgccgccctggagaac
accgccttctcggtgcggtcggtcgagtccaagccctaccgccgctcgccgtacgccccg
ttccgtacgacgaccatgcagcaggaggcctcgcgcaagctcggcttcggcgcgaaggcc
accatgcaggtggcccagaagctgtacgagaacggcttcatcacgtacatgcgtacggac
tccacgaccctgtcggacacggcggtcaccgccgcccgtgcccaggtcacgcagctctac
ggcagcgactacctgccggacaagccgcgcacgtacgcgggcaaggtcaagaacgcgcag
gaggcgcacgaggcgatccgcccgtcgggcgatcgtttccgcacccctgccgagaccggt
ctgaccggtgaccagttccggctctacgagctgatctggaagcggaccgtcgcctcccag
atgaaggacgcgacgggcaactccgtcacggtcaagatcggaggccgtgcctccgacggc
cgcgacgccgaattcagcgcgtccggcaagacgatcaccttccacggcttcctcaaggcc
tacgtcgagggcgccgacgacccgaacgccgagctggacgaccgcgagcgcaggctcccg
caggtcgccgagggcgacgcgctctccgccgacgagatctccgtcgacggccacgcgacc
aagccgccggcccgctacaccgaggcctcgctggtcaaggagctcgaagagcgcgagatc
ggccgcccgtcgacgtacgcgtcgatcctcggcacgatcctcgaccgcggatacgtcttc
aagaaggggacggcgctcgtcccctcgttcttgtcgttcgccgtcgtcaacctcctggag
aagcacttcgggcggctcgtcgactacgacttcaccgccaagatggaggacgacctcgac
cgcatcgcgcgcggcgaggcgcaggcggtgccgtggctgcggcgcttctacttcggtgag
ggcgagggctccggctccgcggccgaggcgggcaacggcgacggcgaccacctcggcggc
ctcaaggagctcgtcaccgacctcggggcgatcgacgcccgcgaggtgtcctccttcccc
gtcggcgacggcatcgtgctccgcgtgggccgctacggcccctacatcgagcgcggtgag
cgggactccgagaaccaccagcgcgccgacgtgccggaggacctggcgcccgacgagctg
accgtggagtacgcggaggaactgctcgccaagccgagcggcgacttcgagctgggcacg
gacccgcagagcggccaccagatcatcgccaaggacgggcggtacggcccgtacgtcacc
gaggtgctccccgagggcaccccgaagacgggcaagaacgcggtcaagccgcgcacggcc
tcgctcttcaagagcatgtcgctcgacacggtcaccctggaggacgcgctcaagctgatg
tcgctgccgcgcgtggtcggcgccgacgccgagggcgtcgagatcaccgcgcagaacggc
cggtacggcccgtacctcaagaagggcacggactcccggtccatcgactccgaggagcag
ctcttcacgatcacgctggaagaggccctggagatctactccaagccgaagcagcgcggg
cgggccgcggcgaagccgccgctcaaggagctcggcgaggacccggtcagcgggaagccg
gtcgtcgtcaaggacggacgtttcggggcgtacgtgaccgacggcgagaccaacgcgacc
ctgcgcgcggcggactccgtggaggagatcaccccggagcggggctacgagctgctcgcg
gagaagcgggccaagggccccgccaagaagacggcgaagaaggctcccgccaagaaggcg
accgccaagaagaccgccgcgaagaagacgaccgccaagaagacggcggcaaagaagacg
acggccacggccaagaagaccgccgccaagaaaaccaccgccaagaagacggccgcttcc
gcgaagagcgccgcttccgagagctga
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