Solibacillus silvestris DSM 12223: SOLI23_01025
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Entry
SOLI23_01025 CDS
T04506
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssil
Solibacillus silvestris DSM 12223
Pathway
ssil03420
Nucleotide excision repair
ssil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SOLI23_01025
03430 Mismatch repair
SOLI23_01025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssil03400
]
SOLI23_01025
Enzymes [BR:
ssil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SOLI23_01025
DNA repair and recombination proteins [BR:
ssil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SOLI23_01025
MMR (mismatch excision repair)
Other MMR factors
SOLI23_01025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_22
PhoH
UvrD_C_2
Viral_helicase1
SLFN-g3_helicase
AAA_30
AAA_16
DEAD
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AMO84189
LinkDB
All DBs
Position
209395..211743
Genome browser
AA seq
782 aa
AA seq
DB search
MKAVFLDEQQRLNSVLNVINDQTFQLESETLKLRNEVVNTRKHFWDEIKVNTDSFDDFLE
TVINLRQEAQALAVGESTHHYASKRLAVLHRMKSVPYFGRIDFLEEGFSEQEKIYIGISS
LMDASGEDFLIYDWRAPISSVYYDYEPGPAQYTTPGGKVYGDLKEKWQYVIRDGKLQSMF
DTSLTIGDEILQKVLGKGVDKYMQSIVATIQKDQNRIIRHDQGRMLIVHGAAGSGKTSAA
LQRIAFLLYKYRDRIKADQIILFSPNAMFNSYVSNVLPELGEENMQQVTFQEYLDHRLSK
DFHLENPYHQLEYVLTAANNPSYSARIKGIQFKASVKFFEAIKLYRETLEKSGLLFKDVK
FRGKMIFSSQQLSETFYREHISLSFQSRLEKLKDWLMNKIKEIEKVERSQPWVEEEIELL
SDETYHKIHKYLAKKNGFEREEQADYEMDQDALIQVIVRLKLKAVRKQIQTLDFIDLEGI
YKQLFTDPLLMQQQLKVEVPDEWQAICEDTLQILESGTLYYEDATPFLFLQELIQGFQTN
RSIKHILIDEAQDYSPFQFEFLKRLFPSAKMTVLGDFNQAIFAHASGVGDFQTLNHLYGE
EQTEVINMTRSYRSTKPIIEFTRNLIANGEKIIPFDRAGELPVLTEVENHTDLHQCILSK
ISELQSKGYGSIAVICKSAEESKAAFEALNKIDGIKLIKSGTVEFEKGVIVIPSYLAKGI
EFEAVIIYDASENVYGDESLRRVFYTACTRAMHVLQLYSVGRPSSFMQKALDGNLLQHEL
TS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagttttcttggacgaacaacaacgtttaaatagtgttctgaatgtaattaat
gatcaaacatttcaactggaatcagaaacgttaaagctccgaaacgaggtagtaaatact
cgtaagcatttttgggatgaaatcaaagtgaatacggattcgtttgatgactttctggaa
accgttattaatttaagacaagaagcgcaggcattagctgttggtgaaagtacacaccac
tatgcatccaaaagattagctgtccttcatcgtatgaagtcagtaccttatttcgggcga
atagattttcttgaagaaggattttcagagcaggagaaaatttatattggtatttcatct
ttgatggatgcaagtggtgaagacttccttatttatgactggagagcaccgatttcaagc
gtctactatgattatgagcctggtcccgcacagtatacaacgcctgggggcaaggtttac
ggtgatctcaaggaaaagtggcaatacgttattcgtgatggaaaactgcaatctatgttt
gacacaagtctcacgattggtgacgaaattttacaaaaggtgcttggaaaaggcgtggat
aagtatatgcaaagcattgtagcaacgattcaaaaggatcagaaccgtattattcgccat
gatcaagggcgtatgcttattgtgcacggtgcagcgggcagcggtaaaacttcagctgca
ttacaaagaatcgcatttttattgtataaataccgggaccgtataaaagcagaccaaatt
atattattttcaccgaatgctatgtttaatagctatgtttccaacgtacttccagagctc
ggtgaagagaatatgcagcaagttacatttcaggaatatttggatcatcgcttaagtaaa
gatttccatttggaaaacccgtatcatcaattggaatatgtactgacggcagcaaataac
ccttcatatagcgcaagaattaaaggcattcaatttaaagcatctgtaaaatttttcgag
gcgattaaactatacagagaaacattggaaaaatcaggcctgctatttaaagatgtcaaa
ttcagagggaaaatgatcttttcctcacaacaattgtcggagacgttttatagagagcat
atttcactgagtttccaaagcagacttgaaaagctgaaagactggctaatgaataaaatt
aaagaaatagaaaaagtagaacgttctcagccatgggtagaagaggaaattgagctacta
agcgatgagacgtatcataaaattcataaatatttagcaaagaaaaacggctttgaaaga
gaagagcaagctgattatgaaatggatcaggatgcgcttattcaagtaatcgtccgcctg
aaattgaaggcagtgagaaaacaaattcaaacactggactttattgatttagaagggatc
tataagcagctatttacagatccattactgatgcaacagcaattaaaagtagaagtgcca
gatgagtggcaagctatatgtgaagatacacttcaaatactggaatcgggaaccctgtat
tatgaagacgcgacaccattcctatttttgcaggaattgattcaaggctttcaaacaaac
cgttcgatcaagcatatcctcattgatgaggcgcaggactattcaccgtttcaatttgaa
tttctgaagcgcctattcccttcagccaaaatgacagtgctaggtgattttaatcaggcc
atttttgctcatgcgagtggagtgggagattttcaaacgctcaaccatctttatggagaa
gaacaaacagaagtaatcaatatgacaagaagttaccgttcaacgaaaccgattatcgaa
tttacacggaatctgatagcaaatggagaaaaaattatcccgtttgaccgtgctggcgag
ttgccggtgttgaccgaagtggagaatcatacagacttgcaccaatgcatactgtctaaa
atttcggaattacaaagtaaaggctatggaagtattgcagttatttgtaaatcagcggag
gaaagtaaagcggcatttgaggcattgaataaaattgatgggattaagctaataaaaagc
ggtacagtagaatttgagaaaggggtaatagtcattccttcgtatttagcgaagggaatt
gaatttgaagcggtcattatttatgacgcatccgaaaatgtatatggtgatgaaagtcta
cgcagggttttttatacagcctgtacaagggcaatgcacgtactgcaactgtatagcgta
gggagaccaagttcttttatgcaaaaggctttagatggaaatctcctacaacatgaattg
acttcataa
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integrated database retrieval system
