Sclerotinia sclerotiorum: SS1G_00063
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Entry
SS1G_00063 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssl03016
]
SS1G_00063
Enzymes [BR:
ssl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SS1G_00063
Transfer RNA biogenesis [BR:
ssl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SS1G_00063
Prokaryotic type
SS1G_00063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
DUF1510
Motif
Other DBs
NCBI-GeneID:
5494824
NCBI-ProteinID:
XP_001597977
UniProt:
A0A1D9PZU6
A7E441
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MASFENNEQGSLPRKRQKLDSSSSKPSSVPTSISLAYPPSQSDATINSNINANPSDKMEI
DQPSQSLVSEVALSSQPEHAQEIRSGILHYVNKKNPGFQGILKQRYTDFLVNEISLGGEV
VHLKDLKAPQIHQNRNAANANAVSADIVDENQPVAEAAGQNESEQATSADSAIAEAAPLT
DIANGHPSTAPITSVIETNVDVPAQPSAENPNAVQIKEIRSNDMEVLVEYFGNTLALQII
ELDKKIQQKPNAKASSFGSLQSEPIDDRPRRGRIHGFLRSRFESRLETEALDDNSISIFA
AAPQQRDRGQNQRGRGQQNSGRGDFRGQSNGQPKPKGKVGWQELGGEYLHFTLYKENKDT
METVNLLSKLLRTKTKDFAYAGTKDRRAATAQRVSAFRHHVKSMADLNQKLRYGVRVGDF
KYEKYPLRLGDLEGNVFTITLRDCNFGDDTDMDDATKVQSAKNVVGDAIAHLQTRGFLNY
FGLQRFGTFAIGTHEIGKLILKGNFKGAVDALLTFSEDALAVAQSGKDGGSIGRDDMGRA
LAIHKFRETGKNYCRDHLPQRFSAERAVIQHLSSARKHDDYAGAILSISRHLRTMYVHSY
QSFIWNVVASRRWERYGDKVIEGDLVLVESKAPEQRDEVDENGEVVIHASGGDAALSSDE
VFQRARCLSAEEAGSGNFTIFDIVLPMPGFDIEYPSNEIGDYYKEFMAGEQGGGLDPADM
RRKIKDFSLSGSYRNLIGKVREGMTFEVKTYHDEREQLVETDLEIIEKAKTQANGPSHIA
TTHVYTRKAGDPHGYASFQENKLHPDNDQENNGIQNDRRGREQGGRARHMADAVEEGRQN
NALYAGSAQHNAWKALPTKLAEEDKASAEAWEEEKLKPVDVDAIKQPMYKETFIQTSADD
EGRRTGVRIQQTLGSKNEVIAENTSKDATSGTEKKLKVEVTELPGAESDEDNEAQEGGVK
LEASVGLKRSAEEISKGSVDRNEKDQAVTEVVEVDDEKVSNPVVSSTEVKQEDKPSESLE
ATSADAEMASAPGGEEATEESRPARLAVIVKFGLGSSMYATMALRELMQRGGVQVYQPDF
SSGR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggctagcttcgaaaataacgaacaaggttcgttacctcgaaagaggcagaagctcgac
tcgagctcttccaaaccaagctctgttcccacctcaatttctcttgcatatcccccttct
caatcagacgcaaccatcaattcaaatataaacgcaaatccaagtgacaaaatggaaatc
gatcagccaagccaaagtttggtttccgaagttgcattatcttcccagcctgagcatgct
caagaaattagatctggaatacttcactatgtcaacaagaaaaatcctggattccaaggt
atattaaagcaaagatacacagatttcctggtcaatgaaatttccctgggaggagaagtt
gttcacctgaaggatttgaaagctcctcaaattcatcaaaacagaaatgcagcaaatgcc
aatgctgtttcagcagacattgttgatgagaaccagccagtagcagaagctgcggggcag
aatgaatcagagcaagccacttctgcagattctgctatagctgaagctgcgcctcttact
gatattgccaatggccacccctctacggctccaatcacttcagttattgaaactaatgtt
gatgttcctgcacagccatctgcggaaaatccaaatgccgttcaaatcaaagaaatccga
tctaacgatatggaagttcttgttgagtattttggtaataccctagctctccagatcatt
gagctcgataaaaaaatccaacagaaaccaaacgctaaagctagttcgtttggatcttta
cagtccgaaccgattgatgatagaccccgtcgtggacgtattcatggatttttgcgttcg
cgttttgagtcgcggctggagactgaagccttggatgataattctattagcatattcgca
gctgctccgcaacaacgtgacagaggacaaaaccaacgtgggagaggacaacaaaattcc
ggccggggggatttccgtggtcaatcgaatggccagccaaaacccaagggaaaagttgga
tggcaagaacttggcggtgaataccttcacttcacactttacaaagagaataaggacacc
atggaaactgtcaacttgctgtctaaattgctgagaactaaaaccaaagatttcgcctac
gcaggcaccaaagaccgtcgagcggccaccgcacagcgtgttagtgctttcagacatcat
gttaaaagcatggctgatctcaatcagaagctgagatacggcgtaagagttggtgacttc
aagtatgagaagtatccacttagactgggtgatctcgagggcaacgtttttaccattacc
ttacgtgattgcaatttcggcgacgacactgacatggacgatgctacaaaggttcaatcg
gcaaaaaatgttgttggtgatgctattgcacatttacaaacccgtggtttccttaactac
ttcggcttacaacgtttcggtactttcgcgatcggcacacacgaaatcggcaagttgatc
ttaaaaggaaacttcaagggtgctgtggatgctttgctcacattcagtgaggatgcactc
gcagtagctcagtcgggaaaagatggaggaagtattggcagagatgatatgggacgcgcc
cttgctatccataaattccgggaaactggcaaaaactactgtagggaccatcttccacaa
agattttccgcggagcgtgctgtcattcaacacttgtcctcggcccgcaagcatgacgat
tacgcaggtgctatactatcaatttcgcgccatctccgtaccatgtacgtgcattcatat
caatctttcatttggaacgtcgtagcctccagaagatgggagcgctatggagataaagtt
attgagggcgatcttgttttggtagagagcaaagcccccgaacaaagagatgaagttgat
gaaaatggagaagttgtgattcatgcatctgggggagatgcagcacttagttccgatgaa
gttttccagcgcgcacgctgtctttcggccgaagaagctggcagcggcaattttaccatc
tttgatattgtcctccctatgccaggttttgacattgaataccctagcaacgaaattgga
gattattacaaggaattcatggctggtgaacaaggcggcggtctggatcctgccgatatg
cgtcgaaagatcaaggactttagtctgagtggtagctacagaaaccttattggcaaagtc
agagagggcatgactttcgaagtcaaaacctaccacgatgaaagagaacagttggttgag
actgacttggagatcatcgagaaggccaagactcaggcgaatggtcctagccacatcgca
accactcacgtatatactagaaaagcaggtgatccacacgggtatgcgtctttccaggag
aataagcttcatccagataacgatcaagagaacaatggcattcagaacgatcgacgtgga
agagaacaaggtggccgtgctcgtcacatggctgatgctgtggaagaaggtcgccaaaat
aacgctctttacgctggtagcgctcagcataatgcttggaaagcactacctaccaagctt
gctgaagaagacaaagcttccgctgaagcctgggaggaagaaaagctaaagcctgtcgat
gtggatgctatcaagcagccaatgtataaggagacattcatacaaacttctgcagatgat
gagggtcgtcgcactggggtcagaattcaacaaactctcggttcaaagaacgaggttatc
gcagagaacacctcgaaagatgcaacatcaggtaccgagaagaagctaaaggttgaagtc
accgagctcccaggtgccgaatccgacgaggacaatgaggctcaagaaggaggtgtcaag
ctcgaagcttcggttggtctgaagagatctgctgaagagatttcgaagggatctgttgac
cggaacgagaaagaccaagcagttaccgaagttgttgaagttgacgatgagaaggtcagc
aatcctgttgtatcttctactgaggtcaagcaggaggataaaccatccgaatcacttgag
gcaacatctgctgatgctgaaatggcgagcgcaccaggtggtgaagaagctaccgaggag
tcgagacctgcacgacttgctgtcattgtcaaatttggtcttggctcaagcatgtatgct
acaatggctcttcgggagttgatgcagcgaggaggcgtccaggtctaccaaccagacttt
tcttctggcagatga
DBGET
integrated database retrieval system