Sediminispirochaeta smaragdinae: Spirs_1267
Help
Entry
Spirs_1267 CDS
T01287
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
ssm02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_1267
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Spirs_1267
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_1267
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Spirs_1267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
CssAB
Motif
Other DBs
NCBI-ProteinID:
ADK80394
UniProt:
E1R2W2
LinkDB
All DBs
Position
1349941..1350912
Genome browser
AA seq
323 aa
AA seq
DB search
MKRCTDGKTGKVLFLILAGLMIIAAPVFSGGKKESGSDKPVVGLVMKSLANEFFKTMEEG
ARKFAEEDGSFELIPVGMNSETDIDTQVSAMERFITTGVDMIVVAPADSVGMVKSVKKAV
DAGITVVNFDVTLDKDALEAAGLPRDFLFVGPDNADGAEMVGNYLGDTIGKGAKVIIIEG
NPGADNAKQRKEGFMRSVEAYNFDLLASRTAHWETEEANTVMTNLLTKYPDVEGIMCAND
SMAVGVVKALEAAGRAGEIKVVGFDNIGAVQTLIKEGKVLASIDQFGPEMAANAIKIGFR
ILGGEKLSGWQKTPIKLVTAENL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatgtacagatgggaaaaccggaaaggtgctatttttgattcttgccggcttg
atgattattgccgccccggtgttttcaggtggaaaaaaagagagcggcagtgataagccg
gttgtcggattggtgatgaagtctttggcaaatgagttttttaagaccatggaagaggga
gcacgaaagtttgccgaagaagacggaagcttcgagctgattcctgtcggtatgaattcc
gaaacggatatcgatacccaggtaagtgccatggagcgttttatcaccacaggcgtcgat
atgatcgtcgttgcccctgccgattccgtcggcatggttaaatccgtcaaaaaggccgtt
gatgctggtataactgttgtaaatttcgacgttaccttggacaaggatgcacttgaggct
gccggactcccgagagattttctttttgtcggcccggataatgccgatggcgcggagatg
gtcggtaattatcttggcgataccatcggcaaaggcgccaaagtgatcattatcgaaggc
aaccccggagccgacaatgcaaaacaacgaaaagaggggtttatgcgctcggttgaagcg
tataatttcgacctgcttgcatcgagaaccgctcactgggaaacagaggaagccaatacg
gttatgaccaacctgctgacaaagtatccggatgtggaaggaatcatgtgtgccaacgat
tccatggctgtcggtgttgtgaaagccttggaagcagccggccgggcaggagaaatcaag
gtcgtcggattcgataatatcggggccgttcagaccctcattaaagagggaaaagttctt
gctagcattgatcaattcggtcctgagatggcggcgaatgccattaagatagggttcagg
attcttggcggagagaagttgtcgggatggcaaaagacccccatcaagctggtaacggca
gaaaatttataa
DBGET
integrated database retrieval system
