Sediminispirochaeta smaragdinae: Spirs_1448
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Entry
Spirs_1448 CDS
T01287
Name
(GenBank) fumarate lyase
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00020
Citrate cycle (TCA cycle)
ssm00620
Pyruvate metabolism
ssm01100
Metabolic pathways
ssm01110
Biosynthesis of secondary metabolites
ssm01120
Microbial metabolism in diverse environments
ssm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Spirs_1448
00620 Pyruvate metabolism
Spirs_1448
Enzymes [BR:
ssm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Spirs_1448
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
ADK80575
UniProt:
E1R540
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All DBs
Position
1548538..1549938
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AA seq
466 aa
AA seq
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MESKKGFRIEKDSMGEMLVPEHVYWGAQTARAVKNFTVSSRRIPEGLRLALGWIKEGAAV
AHGELGTFPEAVCDAVEEAARELRRGKFADQFPIDLYQTGSGTSWNMNANEVVAARANEL
LGFPLGSRGPVHPNDTVNRGQSSNDVIPSAIQIASRLSAKCLARDLRYLAEAVETKAEES
RDVIKLGRTHLQDAVPMTGFQELSAWADQLHQALRRLKALFPVLERIPLGGTAVGTGLNS
SRNFADLTATHIAEGTGCPFVAMDRSFSAIAARDASLEYGDVLNALAVIIMKIAQDLRLL
SSGPRAGLAEIRLPELQPGSSIMPGKVNPVIPEMAVQVAASVMGKHVSLTIACQNSPLQL
NIMMPLIAGELLDSAEMLSRLCRSLADRCISGMSYDRQRCRDLIEGSLAMVTPLALEIGY
EKAARIAKEAYASGRNVREVALKQSGLDSETVQRLLDPERMCGGVD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaaaaaagggtttcgtatagaaaaagattcaatgggagagatgctcgtaccc
gagcatgtgtactggggggcccaaactgcacgggccgttaaaaatttcaccgtgagcagc
cgaagaatccccgaagggcttcggctcgccctcggctggataaaagagggggccgcagtt
gcacatggtgagctcggaacctttcccgaagcggtctgtgacgccgtggaagaggccgcc
cgtgagttgcgccgcggcaagtttgccgatcagttccccatcgatctctatcaaaccgga
agcgggaccagctggaacatgaatgccaacgaagtggttgccgccagggccaatgaactg
cttggctttcctctcggctccagggggcctgtccaccccaacgatacggttaaccgagga
cagtcgagcaacgatgtcattccctctgcaattcagattgcatccaggctctcggccaag
tgtcttgcgcgggatcttcgctatctggcggaagcggtggagacaaaggccgaggagagc
agggacgttatcaaacttgggcgtacccacctccaggatgccgtccccatgaccggtttt
caggagctttcggcctgggccgatcaactgcatcaggccctgcgacgcctgaaagccctt
tttcccgttctcgagcgcattcctctcggcggaaccgcggttggtacgggtctaaacagc
agccgcaactttgccgatcttacggcgactcatattgcggagggaacgggatgtcccttt
gttgccatggatcgcagcttttccgcaatagccgcccgggatgccagccttgaatacggg
gatgtcctcaacgccctggcggtgatcataatgaagatcgcccaggacctcagactcctt
tccagcggcccccgggcaggtctcgcggagatcaggcttcccgagcttcaaccgggaagc
agcatcatgccgggaaaggtgaatcccgttattcccgaaatggccgtacaggtggccgct
tcggtcatgggcaagcatgtaagtcttaccattgcctgccagaacagtcctcttcaactc
aatatcatgatgccccttatcgccggcgagctgcttgattccgccgaaatgctgagtcgg
ctctgccgctcccttgcagatagatgtatctcaggtatgagctacgacagacaacgctgc
cgggatttgatcgaaggaagcctcgccatggttaccccgcttgccttggaaatcggttat
gaaaaggctgcccggatcgccaaggaggcctacgccagcggacggaatgtcagagaggtt
gccctgaagcaaagcggccttgactccgaaaccgtgcagcgcctgcttgatccagaacgg
atgtgcggcggagttgattaa
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