Sediminispirochaeta smaragdinae: Spirs_1903
Help
Entry
Spirs_1903 CDS
T01287
Name
(GenBank) protein of unknown function DUF1605
KO
K03578
ATP-dependent helicase HrpA [EC:
5.6.2.6
]
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Spirs_1903
Enzymes [BR:
ssm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Spirs_1903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
DEAD
HA2_C
AAA_22
HA2_N
nSTAND3
AAA_19
AAA_30
T2SSE
ResIII
PHTB1_N
Motif
Other DBs
NCBI-ProteinID:
ADK81029
UniProt:
E1R6L1
LinkDB
All DBs
Position
complement(2056609..2059137)
Genome browser
AA seq
842 aa
AA seq
DB search
MPDGRHRGMNHPELPIYQQRAKILDELEKNQVIVVESPTGSGKTTQLPMILYEAGYAGRG
IIGVTQPRRIAAVSVSDYIASQMGTKVPGIVGYKMRFEDQTVSETAIKIMTDGILLQELK
ADRYLSRYSVIMVDEAHERSLNIDFILGLLKEIIQERKDLKVIISSATINPKIFSDYFGK
APILHIDAIIHPVEIRYAPLEHPGDPDLLTEKIVSIVGDTVKHKTPGDILIFLSGEKAIK
DAMTALSTSSFAKKLYILPLYGRLTKEEQEQVFVPTPRGKSKVVISTNIAETSVTIDGIT
TVIDSGLAKLNYYNPRTFTSSLIEGPISQASCDQRKGRAGRTRPGVCYRLYDKRDYQHRD
PFTLEEIYRTDLSEVVLRMAELDIQEFEAFDFISPPGRPGIIGAIETLKLLDALTEERQL
TRTGLMMVDFPLSPRHSKILVEAIFRYPSAMEEVLIATAFLSTHTPFVLPPGEEMEARRA
HHQLSDPAGDFISYISIFRQFIKLKGKKRREHFCDTYYLDYRTMGEIVNIKQQLEEIVSG
FGVPISSGGATRDILCSIAAGLVQFVCVRTGRGIYRSLTADRIQIHPGSCMFRESPGFIV
AGEIVRTSRMFARSVSPLHRSWLEEISPSLNLLITTKAGKPSSKKQEKEEKQKAKRDTSW
TIKVGEKNFTMEPYKGKKKIAVLPWEEISPLVQSGESLPQIQENARAKITWSGYEIHTGD
RIASIIKIVPFINPPKDLSYPAPGGKNYNAAEELEALCGHLDALLRTAKTKKSSKRLGFI
TLETDGVGVYWFKVIKSFHTAVDVSLSSLEALADELNESTKHTLVEKVNDAYRRLNTIFE
SY
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
gtgccggatggtcgccacagaggaatgaaccatccagagttgcctatctaccaacagcgg
gcaaagatcctcgatgaactcgagaagaaccaggttatcgtcgtggaaagccctacaggg
tcgggtaagactactcagttacccatgattctttacgaagcaggatacgccgggcgggga
ataatcggagtaacccagccgagaaggatcgcggcggtctccgtctccgattatatcgct
tcccagatgggaacaaaggtccccggcattgtgggatataagatgcgttttgaggaccag
accgtctccgaaaccgccatcaagatcatgaccgacgggattttgctccaggaactaaag
gctgatcgctacctgagtcgctattcggtcatcatggtcgatgaggcccatgagcgcagc
ctcaatatcgactttattttgggattgcttaaggagatcatccaggagcgaaaagacctg
aaggttattatctcctctgccaccatcaacccaaaaatcttttcggactatttcggcaag
gcaccaattcttcatatcgatgcaattatccatcccgttgaaatccgttatgcgccactc
gaacaccccggcgatcccgatctcctaacggaaaagatcgtatccatcgtcggcgatacg
gtaaagcacaaaacgccgggtgacattctcatatttctttccggtgaaaaggcgatcaag
gatgcaatgacagccctttcaacctcctcttttgcaaaaaagctctacattcttccgctg
tacggaaggttgacaaaagaggaacaggaacaagtttttgttcctacgccgagggggaag
tcaaaggtggttatttccaccaacatcgctgaaacaagtgttaccatcgatggcatcacc
acggtcatagattcgggactggcaaagcttaactactacaatccgcgcacctttaccagc
agtctcattgaagggcctatctcgcaggcaagctgcgaccagcgaaaggggcgcgccgga
cgaacacggccgggagtttgttatcgtctttacgataaacgggattatcagcatcgcgat
ccctttacccttgaagaaatctatcgaaccgatctttcggaagtcgttctgcgcatggca
gaactcgatatccaggaatttgaagcctttgattttatcagtcctccggggcgccccggc
atcattggagcaatcgaaaccctcaaactgttggatgcgctcaccgaagaacgacagctc
acgagaacagggctcatgatggtcgattttcctctgagccccagacactccaaaatcttg
gtggaggccatattccgctatccctcggcgatggaagaagtacttattgccaccgccttt
ctttcaacgcataccccctttgtgcttcccccaggagaggagatggaggcaagaagggcc
catcatcagctttccgaccctgcaggggattttatctcctacatttccattttccgacag
tttatcaaactgaaagggaaaaaacggcgggaacacttttgcgatacctactatctcgac
taccgaaccatgggagagatcgtaaacattaaacaacaactcgaggaaattgtttccggc
tttggagtgcccatctcctccggcggagcgacccgggatatcctctgctcgattgccgcc
ggacttgtgcaattcgtctgtgtgcgtacgggaagaggcatctatcgcagcctcaccgcc
gatagaatacaaattcatccgggaagctgtatgtttcgagaatctccagggttcattgtg
gcaggggagattgtccgcaccagcagaatgttcgcacgatccgtcagccccctccaccgt
tcctggctcgaagagatatccccctcactgaatctgctgataacgacaaaagcgggaaag
ccaagttcaaaaaaacaagagaaagaggagaagcagaaagcgaagcgggacacgagctgg
acaatcaaggtcggagaaaaaaactttacgatggagccctacaaggggaaaaagaagatc
gcagtacttccctgggaagagatatcacccctggtccaatcgggagaatcgttgccacag
atacaggaaaacgccagggcaaagattacctggtccgggtatgaaatccatacgggagac
agaatcgccagcattatcaagattgttccctttatcaatccgccgaaagacctttcgtat
cctgcccccggggggaaaaactataatgccgcagaggaactcgaagcgctgtgtggtcac
ctcgatgccttactgcgaactgcaaagacgaaaaaatcgtcaaaacgacttggcttcatt
accctggaaaccgatggcgttggtgtctactggttcaaggtgattaaaagctttcatacc
gcggtggatgtctcgctatcaagccttgaagcccttgccgacgaactgaatgaatcgaca
aagcatacgctggtggaaaaggtaaacgacgcgtatcgtcgcttaaacactatttttgaa
tcatattaa
DBGET
integrated database retrieval system
