Shigella sonnei Ss046: SSON_3402
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Entry
SSON_3402 CDS
T00274
Symbol
fis
Name
(GenBank) site-specific DNA inversion stimulation factor
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssn03000
]
SSON_3402 (fis)
03036 Chromosome and associated proteins [BR:
ssn03036
]
SSON_3402 (fis)
03400 DNA repair and recombination proteins [BR:
ssn03400
]
SSON_3402 (fis)
Transcription factors [BR:
ssn03000
]
Prokaryotic type
Helix-turn-helix
Other families
SSON_3402 (fis)
Chromosome and associated proteins [BR:
ssn03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SSON_3402 (fis)
DNA repair and recombination proteins [BR:
ssn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SSON_3402 (fis)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
Phage_NinH
Inhibitor_I24
HTH_30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AAZ89974
ShiBASE_China:
SSO3402
UniProt:
Q3YWY8
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All DBs
Position
3584058..3584354
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AA seq
98 aa
AA seq
DB search
MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQ
PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaacgcgtaaattctgacgtactgaccgtttctaccgttaactctcaggat
caggtaacccaaaaacccctgcgtgactcggttaaacaggcactgaagaactattttgct
caactgaatggtcaggatgtgaatgacctctatgagctggtactggctgaagtagaacag
cccctgttggacatggtgatgcaatacacccgtggtaaccagacccgtgctgcgctgatg
atgggcatcaaccgtggtacgctgcgtaaaaaattgaaaaaatacggcatgaactaa
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