Shigella sonnei Ss046: SSON_4347
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Entry
SSON_4347 CDS
T00274
Symbol
yjeR
Name
(GenBank) conserved hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssn03019
]
SSON_4347 (yjeR)
03009 Ribosome biogenesis [BR:
ssn03009
]
SSON_4347 (yjeR)
Messenger RNA biogenesis [BR:
ssn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SSON_4347 (yjeR)
Ribosome biogenesis [BR:
ssn03009
]
Eukaryotic type
Pre-60S particles
RNases
SSON_4347 (yjeR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AAZ90834
ShiBASE_China:
SSO4347
UniProt:
Q3YUH8
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All DBs
Position
4618262..4618876
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AA seq
204 aa
AA seq
DB search
MGKTSMIHAIVDQYSHCEWVENSMSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANL
NILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWV
PAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGT
HQAMDDIRESVAELAYYREHFIKL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaacatctatgatacacgcaattgtggatcaatatagtcactgtgaatgggtg
gaaaatagcatgagtgccaatgaaaacaacctgatttggatcgatcttgagatgaccggt
ctggatcccgagcgcgatcgcattattgagattgccacgctggtgaccgatgccaatctg
aatattctggcagaagggccgaccattgcagtacatcagtccgatgaacagctggcgctg
atggatgactggaacgtgcgcacccataccgccagcgggctggtagagcgcgtgaaagcg
agcacgatgggcgatcgggaagctgaactggcaacgctcgaattcttaaaacagtgggtg
cctgcgggaaaatcgccgatttgcggtaacagcatcggacaggaccgtcgtttcttgttt
aaatacatgccggagctggaagcctacttccactaccgttatctcgatgtcagcaccctg
aaagagctggcgcgccgctggaagccggaaattctggatggttttaccaagcaggggacg
catcaggcaatggatgatatccgtgaatcggtggcggagctggcttactaccgcgagcat
tttatcaagctgtaa
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