Staphylococcus saprophyticus: SSP0897
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Entry
SSP0897 CDS
T00269
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ssp
Staphylococcus saprophyticus
Pathway
ssp03030
DNA replication
ssp03430
Mismatch repair
ssp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SSP0897
03430 Mismatch repair
SSP0897
03440 Homologous recombination
SSP0897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssp03032
]
SSP0897
03400 DNA repair and recombination proteins [BR:
ssp03400
]
SSP0897
Enzymes [BR:
ssp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SSP0897
DNA replication proteins [BR:
ssp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SSP0897
DNA repair and recombination proteins [BR:
ssp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SSP0897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BAE18042
UniProt:
Q49YT8
LinkDB
All DBs
Position
complement(927780..928334)
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AA seq
184 aa
AA seq
DB search
MSNDAFIALDFETANGKRTSICAVGMVKVVNHQITESFYTLVNPNDYFSQQNIAVHSIHP
EQVEDAPTFQTVYPYMLQFIGDLPVVAHNAAFDMNVLHESISAFGFDTPNMTYFCSLQLS
RRTVENHRYGLNYMMQYYNLDFHGHHDALNDAKACAMITFRLLKHYDDLPSMLNIYGKDL
KDKD
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgatgcatttatagctttagattttgaaactgccaacggtaaacgtacaagt
atttgtgctgttggtatggttaaagtagtcaaccaccagataacagaatctttctataca
cttgttaaccctaatgactatttctcacaacaaaatatcgcagtacacagcatacatcct
gaacaagttgaagatgcgcctacatttcaaacagtatatccctatatgttgcaatttatc
ggcgatttacccgtcgttgcacacaatgcagcatttgatatgaacgttctacacgaaagt
attagtgcttttggttttgatacccctaacatgacttacttttgctctttacaactttca
agaagaacagtagaaaatcatcgctatggtttaaattacatgatgcaatattataattta
gattttcatggacatcatgatgcgctcaatgatgctaaagcatgcgctatgattacgttc
cgtctcttaaaacattatgatgatttacctagtatgttaaatatctacggcaaggattta
aaagataaagattaa
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