Streptococcus suis D9 (serotype 7): SSUD9_1089
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Entry
SSUD9_1089 CDS
T02022
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssq
Streptococcus suis D9 (serotype 7)
Brite
KEGG Orthology (KO) [BR:
ssq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssq03032
]
SSUD9_1089 (topA)
03400 DNA repair and recombination proteins [BR:
ssq03400
]
SSUD9_1089 (topA)
Enzymes [BR:
ssq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SSUD9_1089 (topA)
DNA replication proteins [BR:
ssq03032
]
Prokaryotic type
DNA Topoisomerases
SSUD9_1089 (topA)
DNA repair and recombination proteins [BR:
ssq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SSUD9_1089 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
DUF2996
Toprim_4
HypA
Motif
Other DBs
NCBI-ProteinID:
AER17290
LinkDB
All DBs
Position
complement(1090675..1092768)
Genome browser
AA seq
697 aa
AA seq
DB search
MATKKVSKKKTTTKKNLVIVESPAKAKTIEKYLGKNYKVVASVGHIRDLKKSSMSIDFDN
NYAPEYINIRGKGPLINSLKKEAKNAKQVFLASDPDREGEAISWHLAHILGLDANDKNRV
VFNEITKDAVKNAFQEPRAINLDLVDAQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQ
SVALKLIIDRENEISNFKPEEYWTIDATFKKGSKKFQASFYGIDGKKTKIENNEQVKEIL
ARLDGDDFLVEQVERKERKRNAPLPYTTSTMQMDAANKINFRTRKTMMVAQQLYEGVSLG
TGGTQGLITYMRTDSTRISPVAQAQAADFITERFGATYSKHGNKVKNASGAQDAHEAIRP
SNVNLTPESIAKYLDKDQLRLYTLIWNRFVASQMAVAVFDTMSVRLGQNGIVFAANGSQV
KFDGYMAVYNDADKNKMLPDMEQGDTVVRASTNPEQHFTQPPARYSEATLIKTLEENGVG
RPSTYAPTIETIQKRYYVKLAAKRFEPTELGEIVNKLIVEFFPDIVNVKFTADMEQKLDD
VEIGKEQWQKVIDGFYQPFKVELSKAEEQMEKIQIKDEPAGFDCDVCGHEMVIKLGRFGK
FYACSNFPDCRNTKQITKEIGVTCPVCQKGQVIERKSKRNRLFYGCDRYPECEFTSWDKP
VGRSCPKCDHYLVEKKVRGGGKQVVCPNGDYEEDKIK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaaaaagttagtaagaaaaaaacaacaaccaagaaaaatctcgttattgta
gagtcgcctgctaaggcaaaaacaatcgaaaaatatcttggtaaaaattataaggtcgtt
gcttcagtcgggcatattcgagatttgaagaaatctagtatgtctattgattttgataac
aactatgcacctgagtacatcaacatacgtggaaaaggaccactcatcaattctttgaaa
aaagaagcaaaaaatgctaagcaagtctttctcgcgagtgacccggaccgcgaaggagaa
gcaatttcttggcatttggctcacattttgggattggacgcaaacgataaaaaccgtgtt
gtctttaatgaaattacaaaagatgcagtaaaaaatgcctttcaggagccacgtgctatt
aacctagacttggtagatgcccagcaagctcgtcgcgtcttagaccgtattgtagggtac
tccatatcacctattttatggaagaaagtcaaaaaaggtctgtcagcaggacgtgttcaa
tcggttgctctcaaattaataatcgaccgtgaaaatgaaatcagcaatttcaaaccagaa
gaatattggacaattgatgcaaccttcaaaaaagggagcaagaaattccaggcttcattc
tacggtatagatggaaagaaaactaaaattgaaaacaatgagcaggttaaagaaattctc
gcccgacttgatggagatgatttcttagtagaacaggttgagcgtaaggaacgcaaacga
aatgcacctctaccttacacaacttctactatgcagatggatgcggctaataaaatcaat
ttccgtactcgtaaaaccatgatggttgcccaacaactttatgagggtgtcagtcttggc
acaggtggtacccaaggtttgattacctatatgcgtacggattcaacacgtattagccct
gttgcacaagcacaagctgctgactttatcacggagcgttttggtgctacctattcaaag
catggtaataaagtaaaaaatgccagtggtgcacaagatgcccacgaagccattcgtcca
tcaaatgttaacttaacacctgaatcaattgcaaaatatctggacaaggaccagttgcga
ctatatacactgatttggaatcgttttgtcgcaagtcagatggctgtagcagtttttgat
accatgagtgttcgtttgggtcaaaatggtattgtctttgctgctaatggtagccaagta
aaattcgatggttatatggctgtctataacgacgctgataaaaataaaatgttgccagat
atggaacaaggtgacacggtggtgcgcgcgtcaacaaatccagaacaacactttactcag
ccaccagctcgctactctgaagcaaccttaattaaaacattagaagagaatggtgtaggt
cgcccgtcaacctatgcaccaacgattgaaaccattcaaaaacgctattatgttaagctt
gcggctaagcgatttgaaccaactgaactcggagaaatcgttaataagctgattgttgaa
tttttcccagatattgtcaatgtcaaatttacagccgatatggagcaaaaattggatgat
gtagaaatcgggaaagagcagtggcagaaggtcattgacggtttctatcagccattcaag
gtagaattatctaaggcagaagaacagatggaaaaaatccaaattaaggatgaaccagct
ggctttgactgtgatgtttgtggacatgaaatggttattaaattaggtcgctttggaaaa
ttctatgcatgcagcaatttcccagactgtcgcaataccaagcaaatcactaaagaaatc
ggtgtgacttgtccagtttgccaaaaagggcaagtgattgaacgcaagagtaaacgcaat
cgtcttttctatggttgcgatcgctacccagagtgtgaatttacttcttgggacaagcca
gtcgggcgttcttgtccgaaatgcgaccactatctcgttgagaaaaaagttcgtggtggt
ggtaaacaagttgtctgtccaaatggtgactacgaagaagacaagattaaataa
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