Streptococcus salivarius CCHSS3: SALIVB_1217
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Entry
SALIVB_1217 CDS
T01580
Symbol
recJ
Name
(GenBank) putative single-strand DNA-specific exonuclease (Single-stranded-DNA-specific exonuclease)
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ssr
Streptococcus salivarius CCHSS3
Pathway
ssr03410
Base excision repair
ssr03430
Mismatch repair
ssr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SALIVB_1217 (recJ)
03430 Mismatch repair
SALIVB_1217 (recJ)
03440 Homologous recombination
SALIVB_1217 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssr03400
]
SALIVB_1217 (recJ)
DNA repair and recombination proteins [BR:
ssr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SALIVB_1217 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SALIVB_1217 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SALIVB_1217 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CCB93499
LinkDB
All DBs
Position
complement(1311068..1313269)
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AA seq
733 aa
AA seq
DB search
MITSTYDWKINTKEPDAGFFKLAKERGLAETAAKIAYERGITTEDTLEDFLKADLSHLHD
PYLLHDMDKAVARIRQAIENYEQILVYGDYDADGMTSASIVKEALEMMGAEARVYLPNRF
TDGYGPNESVYKYFIEQEGISLIVTVDNGVAGNEAIAYAQEQGVDVIVTDHHSMPAQLPD
AYAIVHPEHPDTDYPFKYLAGCGVAFKLATALLETIPTEMLDLVAIGTIADMVSLTDENR
IMVKVGLEILKTTERIGLQELLRISDVDPTTISEETVGFKLAPQLNALGRLDDPNPAIEL
LTGFDDEEAQAIALEINAKNEERKEVVQNIFDEAITMVDPDKPVQVLAKEGWHPGVLGIV
AGRIMEQISQTVVVLNIEDGLAKGSARSLESINIFHALDDHRDIFTAFGGHAGAAGMTLP
EENLGRLSEILCHYVYDNDIDTSAKNTLNLDEELQLSELSLDTIKSLEKLAPFGMDNKKP
VFWLHDITVTQARTMGQNGAHLKFKVKQGKDSFDVVAFNKGNLLQEFQQAQGLELAVTLS
VNVWNGQTTLQLMLEDARVDGVQLFDFRSKNMSLPEGLPSVEEAADTEPAVVLNTLPESA
TELKEWFEGKDFQAIYFKNSIKEAYYLTGYGTREQFARLYKTIYQFPEFDVRYKLDELSH
YLKIDKILLIKMIQIFDELDFVTIDNGVMTVNKEAEKRVIEDSQIFQDLKRLVKFQELMA
LGTPQEIYDWLYK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgattacatcaacgtatgattggaaaataaacacaaaagagccagatgctggctttttt
aaacttgccaaagaacgtgggttggcagaaacagcagccaagattgcctatgaacgtggc
attacgacagaagatactcttgaagactttctaaaggctgatttatcacaccttcatgat
ccttatcttcttcatgatatggataaggcagtggctagaattcgtcaggccattgaaaat
tatgagcaaatcttagtctatggagactatgatgcggatggaatgacgtcagcatcgatt
gtcaaggaagcccttgaaatgatgggggctgaagctagagtctatttgcctaaccggttt
acagatggttatgggccaaacgaaagtgtctacaagtacttcattgaacaggaaggcatt
tcactcattgttacagtggataatggagtagcgggtaatgaggctatcgcttatgcgcaa
gagcaaggtgtggacgttatcgttacagaccatcacagtatgccggcacagcttccagat
gcctatgccattgtccatccagagcatccagataccgattatccttttaagtatttggca
ggttgtggtgtagctttcaaattggcaactgccctccttgaaactattcctactgagatg
ttggacttggtagccattggtaccattgccgatatggttagcctaacggatgaaaatcgt
attatggtcaaggtcggcctggaaattctaaagactactgagcgtattggactgcaagag
ttactccgtatttcagatgtagacccaacaacgatttctgaagaaacggtaggatttaaa
ctggcccctcaactcaatgccttggggcgcttagatgatccaaatccagccattgaactg
ctgaccggatttgacgatgaagaagcccaagccattgctctggaaatcaatgctaaaaat
gaagaacgtaaggaagttgttcaaaacatctttgatgaagccataaccatggtagacccg
gacaaacctgttcaggttctggccaaggaaggctggcatcctggcgttctaggtattgtg
gcggggcgtatcatggaacaaatcagtcagacagtagtggttttgaatattgaagatggc
ttggctaagggttccgctcgtagtttggaatctatcaatatcttccatgcccttgatgac
caccgagacatctttactgcttttggaggacatgctggagcggcggggatgacccttcct
gaagaaaatcttggacgactatcagagattttgtgtcattatgtctacgataatgacatt
gatacgagtgccaaaaatacgttaaatttagacgaggagctccagctcagtgagcttagc
ttggataccatcaagagccttgaaaaattagcaccttttggtatggacaataaaaagcca
gtcttttggctacatgatattaccgttactcaagctaggactatgggacaaaacggagcc
catcttaagtttaaggttaagcaaggcaaggatagctttgatgttgtcgcttttaacaaa
ggtaatcttcttcaagaattccaacaagctcagggtttggaattggcagtgaccttgtct
gttaatgtttggaatggtcagacaacgctccagctcatgctagaagatgcgcgtgtggat
ggtgttcaattatttgattttcgatcaaaaaacatgtcactgcctgaaggtctaccatcg
gtagaagaagcagcagacacagagcctgcggttgtcctcaacaccctacctgaatcagcg
acagaattaaaagagtggtttgaaggtaaagattttcaggctatctattttaaaaatagc
attaaggaagcctattatctgacaggttatggaacaagagagcaatttgcaaggctctat
aaaaccatttatcaattcccagaattcgatgtccgctataaactggatgaactcagtcat
taccttaaaatcgacaagattctcctgattaagatgattcaaatctttgatgaattggat
tttgtgactattgataatggtgttatgacagtcaataaagaagctgaaaaacgtgtgatt
gaggacagtcagattttccaagatctgaaacgactcgttaagttccaagaacttatggct
ttgggaacaccacaggaaatttatgactggctttataagtag
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