Streptococcus suis YB51 (serotype 3): YB51_2050
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Entry
YB51_2050 CDS
T03173
Name
(GenBank) Hydrolase (HAD superfamily)
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ssuy
Streptococcus suis YB51 (serotype 3)
Pathway
ssuy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssuy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YB51_2050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssuy03019
]
YB51_2050
Messenger RNA biogenesis [BR:
ssuy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YB51_2050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DivIVA
ATP-synt_B
KhpA-B_KH
LapA_dom
Motif
Other DBs
NCBI-ProteinID:
AGW86782
LinkDB
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Position
417054..418667
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AA seq
537 aa
AA seq
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MEIITVVVTLVSALIGLVLGYFAISLKMKSAKETAELTLLNAEQEASNVRGRAEEQAEVI
LKTAERDRQTLKKELLLEAKEEARKYREEIAEEFKSERQELKQIESRLTERATSLDRKDD
NLTNKEKTLEQKEQSLTDKAKHIDEREQEVVKLEEQKALELERVAALSQEEAKEIILTDT
RDKLTHEIATRIKEAEREVKERSDKMAKDLLAQAMQRISGEYVAEQTITSVHLPDDAMKG
RIIGREGRNIRTFESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTMETLLQDGRIHPAR
IEELVEKHRVEMDNRIREYGEAAAYEVGAPNLHPDLIKIMGRLHFRTSYGQNVLRHSIEV
AKLAGVLAAELGENVNLARRAGFLHDVGKAIDREVDGSHVEIGTELAKKYKENPIVINAI
ASHHGDVEATSTIAVIVAAADALSAARPGSRRESMEAYIKRLQDLEEIANSFEGIKQSYA
IQAGREIRIIVHPNKVTDDQITILAHDVREKIENNLDYPGNIKITVIRETRATDVAK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcattacagttgtagtgactcttgtttctgctctcattggtttagtattaggt
tactttgccatttctttgaagatgaaatctgcaaaagaaactgcagaattgacactttta
aacgcagaacaagaagctagtaatgttcgtggtcgagcagaagagcaagctgaggttatt
ctaaaaacagctgagcgcgatcgccagaccttgaaaaaagaattactcttggaagctaag
gaagaagctcgtaagtaccgagaagaaattgcagaagaatttaagtcagaacgtcaagag
ttgaagcaaatcgaatcacgcttgacagagcgtgcgaccagcttggaccgcaaagacgat
aatttgaccaacaaggaaaagactttggaacaaaaggaacaaagtctgactgataaagct
aagcacattgatgagcgtgaacaagaagttgtaaaactcgaagaacaaaaagctttggag
ttagaacgagtggcggccctcagtcaagaagaggcgaaggaaattatccttaccgataca
cgcgataaactgacgcatgaaattgcgactcgtatcaaggaagcagagcgtgaagtaaaa
gagcgttctgacaagatggcaaaggacttgttagcccaagcgatgcaacgcatatcaggt
gaatatgtggctgagcagacgattacatcggttcatttaccggatgatgcgatgaaggga
cggattattggacgtgagggtcgaaatattcgtacctttgaaagtctcacaggtatcgat
gttatcattgatgatacaccagaagtggttgttctatcaggttttgatccgattcgccgt
gagattgcccgtatgaccatggagaccttgcttcaagatggtcgtattcatccagctcgt
attgaggagttggttgagaaacaccgtgtagagatggataaccgtattcgtgagtatggg
gaagctgctgcttatgaagttggggcaccaaaccttcatccagacttgattaaaatcatg
ggacgtttgcatttccgtacctcttatggacaaaatgttcttcgccactcaatcgaagtt
gctaaattagcaggtgtacttgctgctgaattgggcgagaatgtgaatttggcacggcga
gctggtttcctacatgacgttggtaaagctattgaccgtgaggtggatggaagccacgtt
gaaatcggtacagaattggctaagaaatataaagagaatccaattgttatcaatgcgatt
gctagtcaccatggcgatgtagaagcgacaagtactattgcagtcattgtggctgcggca
gatgctctgagcgctgctcgtccaggttcgcgtcgtgaatctatggaagcctacatcaaa
cgtctgcaagacttggaagaaatcgccaacagttttgaagggattaaacaatcctatgct
attcaggctggtcgtgaaattcggattatcgttcatcctaataaggtcactgatgatcag
attaccatcttggcccatgatgttcgtgagaaaattgaaaataatctggattatccagga
aatatcaaaatcacagttatccgtgaaacaagagcgacagatgttgctaagtaa
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