Streptococcus suis YB51 (serotype 3): YB51_7790
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Entry
YB51_7790 CDS
T03173
Name
(GenBank) ATP-dependent RNA helicase YqfR
KO
K18692
ATP-dependent RNA helicase CshB [EC:
3.6.4.13
]
Organism
ssuy
Streptococcus suis YB51 (serotype 3)
Brite
KEGG Orthology (KO) [BR:
ssuy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssuy03019
]
YB51_7790
03009 Ribosome biogenesis [BR:
ssuy03009
]
YB51_7790
Messenger RNA biogenesis [BR:
ssuy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
YB51_7790
Ribosome biogenesis [BR:
ssuy03009
]
Prokaryotic type
rRNA helicases
YB51_7790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGW87930
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All DBs
Position
complement(1571415..1572758)
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AA seq
447 aa
AA seq
DB search
MKFTDMKLKPYIQEALKEINFVQPTEVQEKLIPVVLSGRDLIGESKTGSGKTHTFLIPIF
QKLSEELDQVQAVITAPSRELATQIYQAARQLASHSDIEVRVTNYVGGTDKNRQIDKLQA
SQPHIVVGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLDMGFLETVDKIAGSLPKDLQF
MVFSATIPQKLQPFLKKYLSNPVMEQIKTHTVISDTIENWLISTKGRDRNAQILEVTKLM
QPYLAMIFVNTKTRADELHSYLTANGLRVAKIHGDIPPRERKRMMNQVKNLDYQYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGIAITLYQPSDDADIRELEKL
NIKFLPKEMKNGEFVDTYDRDRRANREKSREKLDLEMIGLVKKKKKKVKPGYKKKIQWAV
DEKRRKTKRVEARAKGRAERKAKRQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagatatgaaactcaagccttatattcaggaggctttgaaagaaattaac
tttgtccagccgacagaagttcaggagaaattgattcctgttgttttgtcagggcgagac
ttgataggggaatcaaaaacaggttcgggtaagacccataccttcttgatccctattttc
caaaaattaagtgaggaattggaccaagttcaggctgttattacagccccatctcgtgaa
ttagctactcagatttatcaagcggcacgccagttggcaagtcattcggacatcgaagtt
cgtgtgaccaattatgttggcggtacggataagaaccgtcaaattgacaagcttcaagct
agtcagcctcacattgttgttgggacaccagggcgtatctatgatttggtcaaatcaggt
gaccttgctatccataaagccaaaacctttgtggttgatgaggcagatatgaccttggac
atgggctttttggaaacagttgataagattgctggcagcctgccaaaagacttgcaattt
atggtcttttcagcgaccattccgcagaaactccaaccgtttttgaaaaaatacctgtcc
aatccagtcatggaacaaatcaagacccatacggtcatttcagataccattgaaaactgg
ctgatttcaaccaaggggcgtgaccgtaatgctcaaatcttggaagtaaccaagctcatg
caaccttacttggccatgatttttgtcaatacaaagacacgtgcagatgaattgcatagc
tatttgactgcgaacggtcttcgtgtcgcaaagattcatggggatattcctccacgtgag
cgcaagcggatgatgaaccaggtgaagaacttggactatcagtacattgttgcaacggat
ttagcagcacgtgggattgatattgagggcgtcagtcatgtcatcaatgatgccattcca
caggatctttccttctttgttcaccgtgtggggcgcacaggtcgtaatggtttatcaggc
attgccattaccctttatcagccaagcgatgatgcagatattcgagagctagaaaaactc
aatatcaaattcttgccaaaagaaatgaaaaatggcgaatttgtcgatacctacgaccgt
gaccgccgtgctaaccgtgaaaaatctcgtgaaaaactagatttggaaatgattggcttg
gtcaagaagaaaaagaaaaaagtcaaaccaggctacaagaagaaaattcaatgggctgtt
gatgaaaaacgtcgcaagaccaagcgagttgaagcgcgtgcaaagggtcgtgcagaacgt
aaagccaagcgtcaaaccttttaa
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