KEGG   Streptomyces sp. SirexAA-E: SACTE_0610Help
Entry
SACTE_0610        CDS       T01601                                 

Definition
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ssx  Streptomyces sp. SirexAA-E
Pathway
ssx03030  DNA replication
ssx03410  Base excision repair
ssx03420  Nucleotide excision repair
ssx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ssx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SACTE_0610
   03410 Base excision repair
    SACTE_0610
   03420 Nucleotide excision repair
    SACTE_0610
   03430 Mismatch repair
    SACTE_0610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssx03032]
    SACTE_0610
   03400 DNA repair and recombination proteins [BR:ssx03400]
    SACTE_0610
Enzymes [BR:ssx01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SACTE_0610
    6.5.1.6  DNA ligase (ATP or NAD+)
     SACTE_0610
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     SACTE_0610
DNA replication proteins [BR:ssx03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    SACTE_0610
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     SACTE_0610
DNA repair and recombination proteins [BR:ssx03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SACTE_0610
   NER (nucleotide excision repair)
    Other NER factors
     SACTE_0610
   MMR (mismatch exicision repair)
    Other MMR factors
     SACTE_0610
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_A_N RNA_ligase PNKP_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: AEN08547
UniProt: G2NNB6
LinkDB All DBs
Position
complement(688860..690395)
Genome map
AA seq 511 aa AA seqDB search
MLLARLAHVSLEVAATSARNRKVALLAGLFRETGPDDVPTVIPYLAGRLPQGRLGIGWSA
LSDPPRPADTPVLTVAEAHAELTAVGALSGPGSQAARKERLRRLFAAATADEQHFLRGLL
TGELRQGALEALAADALAAATGAPPADVRRAVMLAGSLQSVARALLADGPEALAAFRLTV
GRPVLPMLAHTAGSVTEAVDKLGPCAVEEKLDGIRVQVHRDGAGVRIYTRTLDDITDRLP
EPATAVARFPGERFVLDGEVIALGPDGRPRPFQETAARVGSRRDVATAAAAVPVVAVFFD
VLALDGRELIDLPFTERHTALDTLVPEPMRVRRVTVTDPRDPAARRAAEEFFEAALGRGH
EGVVAKGASAPYSAGRRGASWLKVKPVHTLDLVVLAAEWGHGRRTGKLSNLHLGARRPDG
TFAMLGKTFKGLTDTMLAWQTERLLELSTGDDGHVVTVRPELVVEIAYDGLQDSTRYPAG
VTLRFARVLGYREDKPPEEADTVDTVLSRRA
NT seq 1536 nt NT seq  +upstreamnt  +downstreamnt
atgctgctcgcccggctcgcccacgtgtccctggaggtcgccgcgacctcggcccggaac
cgcaaggtcgccctgctggccggtctcttccgggagaccgggcccgacgacgtcccgacc
gtcatcccgtacctggcgggccgcctcccgcagggcaggctcggcatcgggtggagcgcc
ctctccgatccgccccgacccgcggacacccccgtactgacggtggcggaggcccacgcc
gagctcacggccgtcggggcgctgtccggtcccggctcgcaggcggcacgcaaggagcgg
ctgcggcggctgttcgccgcggccaccgccgacgaacagcacttccttcgcggactgctc
accggcgagctgcgccagggtgccctggaggccctcgccgccgacgccctggccgccgcc
accggggcgccgcccgccgacgtgcgccgggcggtcatgctcgccgggtcgctccagtcc
gtcgcccgggccctgctcgccgacggtcccgaggccctcgcggccttccgcctcaccgtc
ggccgtccggtcctgccgatgctggcccacaccgccggttcggtcaccgaggccgtcgac
aagctggggccgtgcgccgtggaggagaagctcgacggcatccgcgtccaggtccaccgg
gacggcgccggggtgcggatctacacccgcaccctcgacgacatcaccgaccggctgccg
gagccggccacggccgtcgcccgcttccccggcgagcggttcgtcctggacggcgaggtg
atcgccctcggaccggacgggcgcccccggcccttccaggagacggccgcccgggtcggg
tcccggcgggacgtcgccaccgccgcggcggcggtccccgtcgtcgcggtcttcttcgac
gtcctcgcgctcgacggacgcgaactcatcgacctccccttcaccgaacggcacacggcc
ctggacacgctggtgcccgagcccatgcgggtacggcgcgtcaccgtcaccgacccgcgg
gacccggcagcgcgccgggccgccgaggagttcttcgaggccgccctgggccgcggccac
gagggcgtggtggccaagggcgcgagcgccccgtacagcgccggacggcggggcgcgtcc
tggctgaaggtgaaacccgtccacaccctggacctcgtcgtgctcgccgccgaatggggc
cacggacggcgcaccggcaagctgtccaacctgcacctgggcgcacgccgcccggacggc
accttcgcgatgctgggcaagaccttcaagggcctcaccgacacgatgctcgcctggcag
accgaacggctcctggaactgtccaccggcgacgacgggcacgtcgtgacggtccgcccg
gaactcgtcgtggagatcgcctacgacgggctccaggactccacccgctacccggcgggc
gtcaccctgcggttcgcccgggtcctcggctaccgcgaggacaagccgcccgaggaggcg
gacaccgtcgacacggtcctctcgcgccgggcatga

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