Streptomyces sp. SirexAA-E: SACTE_2048
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Entry
SACTE_2048 CDS
T01601
Name
(GenBank) DNA glycosylase/AP lyase, H2TH DNA-binding protein
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
ssx
Streptomyces sp. SirexAA-E
Pathway
ssx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SACTE_2048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssx03400
]
SACTE_2048
Enzymes [BR:
ssx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SACTE_2048
DNA repair and recombination proteins [BR:
ssx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SACTE_2048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
AEN09950
UniProt:
G2NHG6
LinkDB
All DBs
Position
complement(2275775..2276584)
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AA seq
269 aa
AA seq
DB search
MPEGHTIHRLAADHRARFAGSPVRVSSPQRKFAESAARLDGRVLTDTDAHGKHLFLGFDG
PEWVHIHLGLFGKLGFGTTPAPPPTDTVRLRLVNASDYADLRGPTTCALITEDEKRAIHA
RLGPDPLREDEDGERAWLRISRSRVTVAALLMDQKVVAGVGNVYRAEVLFRHGIDPYRPG
KDLTRSEWDAIWADLGALMREGVRNNRIDTVRPEHLPEAMGRPARVDDHGGEVYVYRRAR
QACHICATEIRTADLAARNLFWCPACQRR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaggggcatacgatccaccgcctggccgcggaccaccgcgcacggttcgcgggt
tccccggtccgcgtgagcagcccgcagcggaagttcgccgagagcgccgcccggctcgac
ggccgggtcctcacggacaccgacgcccacggcaagcacctcttcctgggcttcgacggg
cccgagtgggtccacatccacctcgggctcttcggcaagctcggcttcggcaccaccccg
gcgccgccgcccaccgacacggtccggctgcgcctggtcaacgcctccgactacgccgac
ctgcgcggccccaccacctgcgccctgatcacggaggacgagaagcgcgcgatacacgcc
cggctcggcccggacccgctgcgcgaggacgaggacggcgagcgggcgtggctgcggatc
tcccggagccgggtcaccgtggccgccctgctgatggaccagaaggtcgtggcgggcgtc
ggcaacgtctaccgcgcggaggtcctcttccggcacggcatcgacccgtaccgcccgggc
aaggacctcaccaggagcgagtgggacgccatctgggcggacctcggcgcactgatgcgt
gagggcgtccgcaacaaccgcatcgacaccgtccgccccgagcacctgcccgaggcgatg
ggccgcccggcgcgcgtcgacgaccacggcggcgaggtctacgtctaccgccgggcccgg
caggcctgccacatctgcgccaccgagatccgaacggccgacctcgccgcccgcaacctc
ttctggtgcccggcctgccagcgccgctga
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