Sphingobium sp. SYK-6: SLG_02760
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Entry
SLG_02760 CDS
T01622
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SLG_02760 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssy03400
]
SLG_02760 (ung)
Enzymes [BR:
ssy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SLG_02760 (ung)
DNA repair and recombination proteins [BR:
ssy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SLG_02760 (ung)
Prokaryotic type
SLG_02760 (ung)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAK64951
NITE:
SLG_02760
UniProt:
G2IK88
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Position
complement(288758..289480)
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AA seq
240 aa
AA seq
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MNAPVDPPAVPASLDESWRAALGNEFAAPYMADLKRFLLERKQAGAQIFPRGQDWFNALA
LTPLDKVRAVILGQDPYHGPGQAHGLCFSVRPGVRPPPSLVNIFKELRADIGFTPPGHGH
LDHWARQGVLLLNSVLTVEMGRAGAHAGRGWERFTDAVIARVAALEKPVAFLLWGAHAQK
KAGFVEDVARGGRHLVLRAPHPSPLSAHNGFFGCRHFSQANAFLEAHGRGKIDWTLPDAH
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcctgtcgatccccccgccgtgcctgcgtccctcgatgagagctggcgcgcc
gcgctcggtaatgaattcgccgcgccttacatggcggacctcaagcgcttcctgctggaa
cgcaagcaggccggcgcccagatcttcccgcgcggacaggactggttcaatgccctcgcg
ctgacgccgctggataaggtgcgggccgtcatcctcgggcaggacccctatcacggcccg
gggcaggcgcatggcctgtgcttttccgtccgccccggggtccggccgccgccgagcctc
gtcaacattttcaaggaactgcgcgcggatatcggcttcacgccgccgggccatggtcat
ctcgaccactgggcgcggcagggcgtgctgctgctcaacagcgtcctcaccgtcgagatg
ggccgggcgggcgcgcatgcggggcggggctgggagcgcttcaccgacgcggtcatcgcg
cgggtggcggcgctggaaaagcccgtcgctttcctgctctggggcgctcatgcccagaag
aaggccggtttcgtggaggacgtggcgcgcggcggccgtcacctcgtgctgcgcgcgccg
cacccttcgccgctgtcggcgcataacggcttcttcggttgccgccacttctcgcaggcc
aatgcgttcctggaagcgcacggccgcggcaaaatcgactggacattgccggacgcgcat
tga
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