Sphingobium sp. SYK-6: SLG_16660
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Entry
SLG_16660 CDS
T01622
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssy03032
]
SLG_16660 (gyrA)
03400 DNA repair and recombination proteins [BR:
ssy03400
]
SLG_16660 (gyrA)
Enzymes [BR:
ssy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SLG_16660 (gyrA)
DNA replication proteins [BR:
ssy03032
]
Prokaryotic type
DNA Topoisomerases
SLG_16660 (gyrA)
DNA repair and recombination proteins [BR:
ssy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SLG_16660 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAK66341
NITE:
SLG_16660
UniProt:
G2ISI1
LinkDB
All DBs
Position
complement(1818246..1820963)
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AA seq
905 aa
AA seq
DB search
MSSDETLLAEPSDISPISIVDEMKSSYLDYAMSVIVSRALPDVRDGLKPVHRRILWASHE
GGFVAGRPYRKSAKIVGDVMGNYHPHGDSAIYDALARLAQDWSMRVMLIDGQGNFGSMDP
DPPASMRYTEARLAKVATTALLADIDKDTVDFQDNYDGAHREPTVLPARFPNLLVNGAGG
IAVGMATNIPPHNLGEVLRACKAYMDNGAITTEELMEYIPGPDFPTGALILGQGGARNAY
TTGRGSIIMRSRHEIETLRGDRQQIVLTEIPYQVGKSGLVEKIAEAAKDKRIEGISDIRD
ESNREGVRIVMELKRDATADVVLNQLWRHTPAQSSFPANMLAIRGGRPELLNLREIIEAF
VRFREEVITRRTKFELAKARERAHILLGLVIAVSHLDEVVRTIRASASPVAAREALLARE
WPIADIAPYLRLVEAAEADPTGDTYRLSDAQVRAILDLRLHRLTALGRDEVGSELQGLAT
AIEGFLEILGSRVRLYEVMREEFDAIEAEFATPRRSIIAPAADGIEDEDLIEREDMVVTV
TMQGYIKRTPLDTFRAQNRGGKGRAGMATKEEDVITELFVTSTHTPVLFFSTHGKVYRLK
VWRLPEGGPATRGRPMVNLLPLANGEAIQTVLPLPEDEAEWANLHVMFATARGNVRRNAM
DAFSNIPSNGKIAMKFEGEDADDRLIGVALLTEDDDVLLASRQGKAIRFRADDVRAFQSR
NSTGVRGMTLREGDEVISLSILHRVGTGQDEREDYLRFAPWKGEREDGATSSLDPARYEE
LKAREQFILTVCANGYGKLSSAYEYRRTGRGGQGITNIDNIDRNGPVVASFPATRRHQLM
LVTDQAKLIRIGLDSLRVIGRGSAGVRLFDVAQDEHVVGAARIEESTEDNPDAEGGAPLA
DDTQA
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
ttgagcagcgacgagacactcctcgccgaaccctcggatatcagcccgatcagcatcgtc
gacgagatgaagtcgagctatctcgactacgccatgtcggtcatcgtttcccgcgccctg
ccggacgtgcgcgatggcctcaagcccgtgcatcgccgcatcctgtgggcgagccacgaa
ggcggcttcgtggccgggcggccgtaccgcaagtcggccaagatcgtcggcgacgtgatg
ggtaattaccacccgcatggcgactccgccatctacgatgccctcgcccgcctggcgcag
gactggtcgatgcgcgtcatgctgatcgacggccagggcaatttcggctcgatggacccg
gatccgccggcctccatgcgttataccgaagcgcggctcgccaaggtggcgacgacggcg
ctgctggccgatatcgacaaggacaccgtcgacttccaggacaattatgacggcgcgcat
cgcgagccgaccgtcctgcccgcccgcttcccgaacctgctggtcaatggcgcgggcggc
atcgccgtgggcatggcgaccaacatcccgccgcacaatctcggcgaggtgctgcgcgcc
tgcaaggcctatatggacaatggcgccatcaccaccgaagagctcatggagtatatcccc
ggcccggatttcccgaccggcgcgctgatcctgggccagggcggggcacgcaacgcctac
accaccgggcgcggctcgatcatcatgcgctcgcgccacgagatcgagacgctgcggggc
gaccggcagcagatcgtgctcaccgagatcccctatcaggtcggcaagtccgggctggtc
gagaagatcgccgaggccgcgaaggacaagcggatcgagggcatcagcgacatccgcgac
gaatcgaaccgcgaaggcgtgcgcatcgtcatggagctcaagcgcgacgcgacggcggac
gtggtgctgaaccagctctggcgccacacgccggcccagtcgagcttccccgccaacatg
ctcgccatccgtggcggccggccggaactgctcaacctgcgcgagatcatcgaggcgttc
gtgcgcttccgcgaggaagtcatcacgcggcgcaccaagttcgagctcgcgaaggcgcgc
gagcgggcccacatcctgctcgggctcgtcattgcggtctcccatctcgacgaggtggtg
cggaccatccgcgcttcggccagcccggtcgccgcgcgcgaggcgctgctggcccgcgag
tggccgatcgccgacatcgcgccgtatctgcggctcgtggaagcggcggaagccgacccg
accggcgacacctatcgcctctcggatgcgcaggtgcgcgccatcctcgatctgcgcctg
catcgcctgaccgcgcttggccgggacgaggtgggcagcgagctccagggcctcgccacc
gcgatcgagggcttcctcgagattctcggcagccgcgtgcggctctatgaggtcatgcgc
gaggaattcgacgcgatcgaggcggagttcgccacgccgcgccggtccatcatcgcgcct
gccgccgacggcatcgaggacgaggacctgatcgagcgcgaggacatggtcgtcaccgtg
accatgcagggctatatcaagcgcacgccgctcgacactttccgcgcgcagaaccggggc
ggcaagggccgcgcgggcatggcgacgaaggaagaggacgtcatcaccgagctgttcgtg
acgagcacgcacacgccggtgctgttcttctcgacccatggcaaggtctaccgcctcaag
gtctggcgcctgcccgagggcgggccggcgacgcgcgggcggccgatggtcaatctcctg
ccgctcgccaatggcgaggcgatccagaccgtgctcccgctgccggaagacgaggcggaa
tgggcgaacctgcacgtcatgttcgccacggcgcgcggcaatgtgcgccgcaacgccatg
gatgccttctcgaacatcccgtcgaacggcaagatcgccatgaagttcgagggcgaggat
gccgacgaccggctcatcggcgtcgcgcttctcaccgaggatgacgacgtgctgctcgcc
tcccgccagggcaaggcgatccgcttccgcgcggacgatgtgcgcgctttccagagccgc
aactccaccggcgtgcgcggcatgacgctgcgcgaaggcgacgaggtgatttccctctcc
atcctccaccgcgtgggcaccggccaggacgagcgcgaggattatctccgcttcgcgccc
tggaagggcgagcgcgaggatggcgccaccagctcgctggacccggcgcgctacgaggag
ctcaaggcgcgcgagcagttcatcctcaccgtctgcgcgaacggctatggcaagctctcg
tccgcttatgaatatcggcgcaccgggcgcggcggccagggcatcaccaacatcgataat
atcgatcgcaatggcccggtcgtggcgagcttccccgcgacgcgccgccatcagctcatg
ctggtgaccgatcaggccaagctgatccgcatcgggctcgacagcctgcgcgtcatcggc
cgcggctcggcgggcgtccgcctgttcgacgtggcacaggacgagcatgtcgtgggcgcg
gcgcggatcgaggaaagcacggaggacaatccggacgcggaaggcggcgcgccgctcgcc
gacgacacgcaggcctga
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