KEGG   Sphingobium sp. SYK-6: SLG_20540Help
Entry
SLG_20540         CDS       T01622                                 

Gene name
gatB
Definition
(GenBank) aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
ssy  Sphingobium sp. SYK-6
Pathway
ssy00970  Aminoacyl-tRNA biosynthesis
ssy01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ssy00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SLG_20540 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:ssy03029]
    SLG_20540 (gatB)
Enzymes [BR:ssy01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     SLG_20540 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     SLG_20540 (gatB)
Mitochondrial biogenesis [BR:ssy03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    SLG_20540 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey Cthe_2159
Motif
Other DBs
NCBI-ProteinID: BAK66729
NITE: SLG_20540
UniProt: G2ITL9
LinkDB All DBs
Position
complement(2254043..2255542)
Genome map
AA seq 499 aa AA seqDB search
MSKDYRIQGATGEWEVVIGLEVHAQVVSQAKLFSGAATAFGAEPNTQVSLVDAAMPGMLP
VPNRECIRQAVRTGLALDAQINRWSRFDRKNYFYADLPQGYQISQLYHPLVGEGKLTIEA
DEKAGIAADKDIGIERIHVEQDAGKLMHDQHPTRSYVDLNRSGVALMEIVSRPDMRSPAE
AGAYLRKLRAILRYVGSCDGNMEEGSMRADVNVSVRKPGDEFGTRTETKNVNSVRFVMQA
IEYEAQRQVDVLEGGGRIVQETRLFNPDSGTTRSMRSKEDAHDYRYFPDPDLLPLELDEA
FVEDCRHSLPELPDAKRKRYVEGLGLSDYNAQVLTAEAETARWFEALLAESARIQKKSEG
EVARASANWLLSELYGALNRLGKTLEESPVSPERGAELLALVADGTISGSIAKQVFEIML
ETGDAPARIVEDKGLKQTSDTGAIEAAVAKILAENADKVEQYKGGKEALFGFFVGQTMKA
MQGKANPQVVNELLRKALG
NT seq 1500 nt NT seq  +upstreamnt  +downstreamnt
gtgagcaaggactatcgcattcagggcgctaccggggaatgggaggtcgtcatcggcctt
gaagtccatgcccaggtggtcagtcaggcgaagctcttttcgggcgcggcgacggctttc
ggtgcggagccgaacacgcaggtcagcctcgtggacgccgcgatgcccggcatgcttccc
gtgccgaaccgcgagtgcatccggcaggcggtgcgcacgggcctggcgcttgatgcgcag
atcaaccgctggtcccgcttcgaccggaagaactatttctacgcggacctcccgcagggc
taccagatcagccagctctatcacccgctggtgggcgaggggaagctgaccattgaggcg
gatgagaaagccggcatcgcggccgacaaggatatcggcatcgagcgcatccatgtcgag
caggacgcgggtaagctgatgcacgaccagcacccgacgcgctcctatgtcgatctcaat
cgctcgggcgtcgcactgatggaaatcgtttcgcggccggacatgcgctcgcccgccgag
gccggcgcttatctgcgcaaattgcgcgctatcctgcgctatgtcggctcgtgcgatggc
aacatggaggaaggctcgatgcgggccgacgtgaacgtctccgtgcgcaagccgggcgat
gagttcggcacgcgtacggagaccaagaacgtcaattcggtgcgcttcgtgatgcaggcg
atcgaatatgaggcgcagcgccaggtcgatgtgctggagggcggcggacgaatcgtgcag
gagacgcggctattcaatccggacagcggcacgacgcggtccatgcgctcgaaggaagat
gcccacgattatcgctatttcccggatccggacctgctgccgctggaactggatgaagcg
ttcgtggaggattgccgtcactcgctgccggagctgccggacgccaagcgcaagcgttat
gtcgaaggcctggggctatcggattataacgcgcaggtgctgacggcggaggcggaaacg
gcccgctggttcgaggcgctgctggccgagagcgcgcgcatccagaagaagagcgagggc
gaggtggcgcgcgcgagcgcaaactggctgctctctgaactctatggcgccctcaaccgg
ctcggcaagacgcttgaggagagtccggtgagtccggagcggggcgccgagctgctggcg
ctcgtcgcggatggcacgatttcgggcagcatagccaagcaggtcttcgagatcatgctt
gaaaccggtgatgcgcccgcaagaatcgtggaggacaaaggcctcaagcagacgagcgat
accggcgcgatcgaagcggcggtggcgaagatccttgccgagaatgccgacaaggtcgag
cagtacaagggcggcaaggaagcgctcttcggcttcttcgtcgggcagacgatgaaggcc
atgcaaggcaaggccaatccccaggtggtgaacgagctgctgaggaaagcgctgggttaa

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