Serratia symbiotica: SCc_080
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Entry
SCc_080 CDS
T01672
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ssz
Serratia symbiotica
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssz03019
]
SCc_080 (orn)
03009 Ribosome biogenesis [BR:
ssz03009
]
SCc_080 (orn)
Messenger RNA biogenesis [BR:
ssz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SCc_080 (orn)
Ribosome biogenesis [BR:
ssz03009
]
Eukaryotic type
Pre-60S particles
RNases
SCc_080 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AEW44266
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All DBs
Position
131043..131588
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AA seq
181 aa
AA seq
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MIANENNLIWIDLEMTGLNPESDRILEIATLVTDSNLKVLAEGPVIAIRQSDEQLSLMDD
WNMRTHMGSGLVARVRASDFSEHAAEMVILSFLKQWVVAGTSPICGNSVGQDRRFLFRYM
PKLEAYFHYRYLDVSSLKELVRRWKPNILNEYQKQHSHQAMNDIRESVAELVYYRNHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaaatgaaaataatctgatttggattgatttagagatgacggggctaaacccg
gagagcgatcgtattcttgagattgcaacattagttactgattctaatttaaaggtttta
gctgaagggccagtgattgctatacgccagtctgatgagcaacttagtttaatggatgac
tggaatatgcgcacacatatgggcagtggattagtagcacgggtgagggctagtgatttt
agcgaacatgctgctgagatggtcattctttctttcttgaagcaatgggtagtagcaggt
acatctcctatctgtgggaatagcgtcggtcaggatcgtcgttttttatttcgttatatg
cctaaattagaggcttattttcattatcgttatctagatgttagttctttaaaagaactt
gtgcgtcgttggaaacctaacattcttaatgaataccagaaacaacatagtcatcaagcg
atgaatgatattcgtgaatcagttgctgaattagtatattatcgcaatcattttattaag
ttataa
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