Stanieria sp. NIES-3757: STA3757_20650
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Entry
STA3757_20650 CDS
T05130
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
stan
Stanieria sp. NIES-3757
Brite
KEGG Orthology (KO) [BR:
stan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stan03021
]
STA3757_20650
Transcription machinery [BR:
stan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STA3757_20650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
HTH_11
Sigma70_r4_2
DIMCO_N
MerR
HTH_Mga
HTH_5
MerR_1
HTH_24
DUF6127
IF2_N
DUF3791
Put_DNA-bind_N
Spectrin
DHC_N2
Motif
Other DBs
NCBI-ProteinID:
BAU64692
UniProt:
A0A140K5R5
LinkDB
All DBs
Position
2256588..2257544
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AA seq
318 aa
AA seq
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MKSATKSNDLVRSYLKEIGRVPLLTHEEEILYAKRVQQQIKVEKIKESLQDKLGEEPTES
QWADAAEITVEELRNIIKAGEAAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGM
QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKAQRQLAQ
QKGRTATISELAEELELTPKQVREYLEKSRQPISLDVRVGDNNDTELGDMLEDTGASPED
YATYSSLRKDLDQLMTDLTPQQREVISLRFGLSDGKPLTLAKIGDCLNISRERVRQIERE
ALAKLRKQKTNIREYLAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagcgaccaaatccaacgatcttgtcagaagttatctcaaagagataggaaga
gtacctttgttgactcatgaagaagaaattctttacgccaaaagagtacaacagcaaatt
aaggtagaaaaaatcaaagaatctctccaagataaattaggagaagaaccaactgaatct
caatgggctgatgctgcggaaattacggtagaagaattacgcaatatcattaaagcagga
gaagcagccaaacgcaaaatggtagaagcaaatctccgtttagtagtttctgttgctaaa
aaatacctcaaacgcaatcttgatttacttgatttgattcaagaaggcactattggtatg
caaagaggagtagaaaaatttgaccctaccaaaggttatcgtttctctacctatgcttat
tggtggattcgtcaggctattaccagagcaatcgcagaaaaaggcagaacgatccgctta
cccattcatattactgaaaaactcaataaaatcaaaaaagctcaacgacaattagcacaa
caaaaaggtagaacagctaccatttccgaattagcagaagaactagaactaacacccaag
caagtcagagaatatttagaaaaatctcgtcaaccaatttctttagatgttcgcgttggc
gataacaacgataccgaacttggagatatgctagaagatactggtgcttcaccagaagac
tatgctacctactcctctctacgcaaagatctagaccaattgatgactgatttaactccc
caacaacgggaagtcatctctctgcgatttgggttatcagacggcaagcctcttactcta
gctaaaattggcgattgtctcaatattagccgtgaaagagtacgtcaaattgaaagagaa
gctcttgccaaattacgcaaacaaaaaactaatattcgcgaatatcttgctagttga
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