Starkeya sp. ORNL1: G3545_12565
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Entry
G3545_12565 CDS
T06785
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
star
Starkeya sp. ORNL1
Pathway
star03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
star00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G3545_12565 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
star03400
]
G3545_12565 (recF)
DNA repair and recombination proteins [BR:
star03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G3545_12565 (recF)
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Paralog
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GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
DUF2285
AAA_27
SbcC_Walker_B
AAA_5
Mg_chelatase
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QJP14398
UniProt:
A0A858X0B9
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Position
2616629..2617789
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AA seq
386 aa
AA seq
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MSTASARITRLRLTNFRSYRAADITAGDGPVVLVGPNGAGKTNLLEAISFLSPGRGLRRA
QLGEVAARDSEGVPTESWAVSATVEGAYGEVTLGTGVEADANAESGRSRRTRIDREPVSS
ASAFADHIRVVWLTPEMDGLFLGPPGDRRRFLDRLVLAVDAEHGARVNALERALRSRNRL
LEEPSPDARYLDAVEQELAALAVAVAAARAETVRRLAAGIAAGRDDASPFPWATIALDGA
VERALAQRPATLVEDEYRATLRTGRGRDRAAGRTLEGPHLTDLIVGHGPKAIPAAQGSTG
EQKALLIGLALAHARLVGEMAGIAPVILLDDVVAYLDPARRAALFEALDALGAQVWMTGA
DPAAFAALQGRAERFTVRPGKVEREG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacggcctccgcccgcatcacccgcttgcgcctcaccaatttccgcagctatcgc
gcggcggacatcaccgccggtgacggcccggtggtgctggtggggccgaacggcgcgggc
aagaccaatctgctggaagccatctccttcctctcgccgggccgcgggctgcgccgcgcc
cagcttggcgaggtggccgcgcgcgatagcgagggcgttccgaccgaaagctgggcggtg
tccgccacggtcgagggcgcctatggcgaggtgacgctcggcaccggggtcgaggcggac
gccaacgccgagagcggacgctcgcgccgcacccgcatcgaccgcgagccggtgtcctcc
gccagcgcctttgccgatcatatccgcgtcgtctggctgacgccggagatggacgggctg
ttcctcggcccgcccggcgaccggcgccgcttcctcgaccggctggtgctggcggtcgat
gccgagcacggcgcgcgggtcaacgcgctggagcgggcgctgcgctcgcgcaaccgcctg
ctggaggagccctcccccgacgcgcgctatctcgacgcggtggagcaggaactggccgcg
ctcgccgtcgcggtcgcggcggcgcgggcggagacggtgcggcgcctcgccgccggcatc
gcggcgggccgcgacgacgcctcgccatttccctgggcgacaatcgcgctcgacggcgcg
gtcgagcgggcgctggcccagcgcccggcgaccctggtcgaggacgagtaccgcgccacg
ctgcgcaccgggcgtgggcgcgaccgggcggcagggcgcacgctggaaggcccgcatctg
accgacctcattgtcggccacggtcccaaggcgatcccggcggcgcagggctcgaccggc
gagcagaaggcgctgctgatcggcctcgcgctcgcccatgcccgcctcgtcggcgagatg
gccggcatcgcgccggtgatcctgctcgacgacgtcgtcgcctatctcgacccggcgcgg
cgcgcggcgctgttcgaggcgctcgacgcgctcggcgcgcaggtctggatgaccggcgcc
gaccccgccgccttcgccgcgctgcagggccgggcggaacggttcacggtgcggccgggg
aaggtagagcgggaggggtga
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