Sphingomonas taxi: MC45_03680
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Entry
MC45_03680 CDS
T03398
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stax
Sphingomonas taxi
Pathway
stax03420
Nucleotide excision repair
stax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MC45_03680
03430 Mismatch repair
MC45_03680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stax03400
]
MC45_03680
Enzymes [BR:
stax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MC45_03680
DNA repair and recombination proteins [BR:
stax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MC45_03680
MMR (mismatch excision repair)
Other MMR factors
MC45_03680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AIT05652
UniProt:
A0A097EDL8
LinkDB
All DBs
Position
839298..841586
Genome browser
AA seq
762 aa
AA seq
DB search
MTDLSAPANALQDPPYLKGLNPPQRDAVLTTEGPVLMLAGAGTGKTAALTARLAHLLWTR
KAWPSEILSVTFTNKAAREMRERVGRLVGDAVEGMPWLGTFHAIGAKMLRRHAELVGLQS
NFSILDTDDQLRLLKQLILAADLDEKRFPARSLAGLIDDWKNKGLVPADIDAGESERYAN
GRGGELYAQYQERLKALNACDFGDLLLHMLTVLKTYPEVLKMYQERFKYIMVDEYQDTNV
VQYLWLRLLAQARKNIACVGDDDQSIYSWRGAQVENILKFEKDFPGAKVIRLEQNYRSTP
HILGAASGVIANNGGRLGKTLWTELDAGEKVRVLGVWDGPEEARRVGEEIEAAQRSGKSL
DEVAILVRAQHQTREFEDRFIAIGMPYRIIGGFRFYERAEIRDALAYLRIVNQPSDDLAF
ERIVNVPKRGLGDKALAKIHQLARIEGIPLTIAAARILDTDELTPQARRALGNLVGDIAR
WRDMARDLPHAELARQLLDESGYTAMWQAEKSVDAAGRLENLSELVRAMEEYESLGAFLE
HVSLVMDKEGGVQDPQVTIMTIHAAKGLEYDTVFLVGWEEGLFPSQRSLDEGGTKSLEEE
RRLAYVAITRARRRATILHAANRRIYGQWTSSIPSRFVGELPPEHTDAETTMSGGESLWR
ANWSERADPFADVGRGTGRGPGWQRAAGSGSGFSTAPTRVVESRSSAVSIGNKGRSDLSV
GLRVFHQKFGYGAIAEIEGNKLEIDFEAAGRKRVMDSFVTIG
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatctcagcgcccccgccaacgccttgcaggacccgccctatctcaaggggctc
aacccgccgcagcgcgacgcggtcctgaccaccgaaggcccggtgctgatgctcgccggc
gccggcaccggcaagaccgccgcgctcaccgcccggctcgcgcacctgctgtggacgcgc
aaggcgtggccgtccgagatcctcagcgtcaccttcaccaacaaggcggcacgcgagatg
cgcgagcgcgtcggccggctcgtcggcgacgcggtcgagggcatgccgtggctcggcacc
ttccacgcgatcggcgccaagatgctgcgccgccacgccgaactggtcgggctgcagagc
aatttcagcatcctcgacaccgacgaccagctccggctgctgaaacagctcatcctcgcc
gccgatctcgacgagaagcgtttccccgcgcgcagtctcgccgggctgatcgacgactgg
aagaacaaggggctggttcccgccgatatcgatgccggcgaaagcgaacgctatgccaac
ggccgcggcggcgaactctacgcgcaatatcaggagcggttgaaggccctcaacgcctgc
gatttcggcgatttgctgctgcacatgctgaccgtgctcaagacctatcccgaggtgctg
aaaatgtaccaggagcggttcaaatacatcatggtcgacgaatatcaggacaccaacgtc
gtccagtatctctggctgcgactgctcgcgcaggcgcgcaagaacatcgcctgcgtcggc
gacgacgaccagtcgatctattcgtggcgcggcgcgcaggtcgagaacatcctcaagttc
gagaaggactttccgggtgcgaaggtgatccggctcgaacagaattaccgctcgacgccg
catatcctcggcgccgcctcgggcgtcatcgccaacaacggcggccggctcggcaagact
ttgtggaccgaactcgacgcgggcgagaaggtgcgcgtgctcggcgtctgggacggcccc
gaggaggcgcgccgcgtcggcgaggagatcgaggcggcacagcgcagcggcaagagcctc
gacgaggtggccatccttgtccgcgcgcagcatcaaacgcgcgaattcgaggaccgcttc
atcgcgatcggcatgccctatcgcatcatcggcggcttccgcttctacgaacgcgccgag
attcgcgacgcgctcgcttatctgcgcatcgtcaaccagccgtccgacgacctcgccttc
gaacggatcgtcaacgtccccaagcgcgggctcggcgacaaggcgctcgccaagatccac
cagctcgctcggatcgagggcataccgctgaccatcgccgcggcgcgcatcctcgacacc
gacgaactgaccccgcaggcgcgccgcgcgctcggcaacctggtcggcgacatcgcccgc
tggcgcgacatggcgcgcgacctgccgcatgccgagctcgcccgccagttgctcgacgag
agcggctataccgccatgtggcaggcggagaaatcggtcgacgccgccggccggctcgag
aacctgtccgaactcgtccgcgcgatggaggaatatgaatcgctcggcgcgttcctcgaa
cacgtcagcctcgtcatggacaaggagggcggcgtccaggacccgcaggtgacgatcatg
acgatccacgccgccaagggcctggaatacgacaccgtcttcctcgtcggctgggaggag
gggctgttcccgtcgcagcgctcgctcgacgagggcggcaccaagagcctcgaggaggaa
cgccgcctcgcctatgtggcgatcacccgcgcgcggcggcgcgcgacgatcctccacgcc
gccaaccgccgcatttacggccagtggacgtcgagcattccgagtcgcttcgtcggcgaa
ctgccccccgaacataccgatgccgagacgacgatgtcgggcggggagagcctgtggcgc
gcgaactggagcgaacgcgccgaccccttcgccgacgtcggccgcggtaccggccgcgga
cccggctggcagcgcgcggcgggcagtggctcgggcttctcgaccgcgccgacgcgcgtc
gtcgaaagccggtcgagcgcggtcagcatcggcaacaaggggcgcagcgacctttcggtc
ggcctgcgcgtcttccaccaaaagttcggctatggcgcgatcgccgagattgaaggcaac
aagctcgagatcgacttcgaggcggcgggccgcaagcgcgtgatggacagtttcgtcacg
atcgggtga
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