Streptococcus pasteurianus: SGPB_0675
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Entry
SGPB_0675 CDS
T01524
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
stb
Streptococcus pasteurianus
Pathway
stb03410
Base excision repair
stb03430
Mismatch repair
stb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SGPB_0675 (recJ)
03430 Mismatch repair
SGPB_0675 (recJ)
03440 Homologous recombination
SGPB_0675 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stb03400
]
SGPB_0675 (recJ)
DNA repair and recombination proteins [BR:
stb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SGPB_0675 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SGPB_0675 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SGPB_0675 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DUF218
Motif
Other DBs
NCBI-ProteinID:
BAK29769
UniProt:
F5X5S9
LinkDB
All DBs
Position
707143..709353
Genome browser
AA seq
736 aa
AA seq
DB search
MITSKYNWKNIEKEPDNGFFELTKKEKLTELASQILYSRGVDTAEKLIQFLSTDLSQLHD
PYLLHDMDKAVNRIRQAIENYEQILVYGDYDADGMTSASIMKEALEMLGAEAQVYLPNRF
TDGYGPNESVYKYFIEQQNVSLIITVDNGVAGNEAIAYAQSQGVDVIVTDHHGLPAELPE
AFAIVHPEHPEADYPFKYLAGCGVAFKVACALLESIPTEMLDLVAIGTIADMVSLTDENR
IMVKVGLEILKQTERIGLIELIKVSDVDMADVNEETVGFKIAPQLNALGRLDDPNPAVEL
LTGFDDEEAHNIAKMINAKNEERKEIVQKIFDEAMSMVDLEKPVQVLAKEGWHPGVLGIV
AGRILEQIAQPVIVLNIEDGIAKGSARSIEAINIFHALDEHRDLFEAFGGHAGAAGMTLV
TENLDKLSQVLCDYIAENDIDLSQKKELVIDEVLELSEINLDTVHSLEKLAPFGMDNPKP
VFEIKDFVVKQARTMGQNGAHLKLKIAQGTTAIDFVAFNQGHLAQEFQQVQNLCLATTLS
INKWNGQTTVQLMLEDARVEGVQLIDIRSKTASLPERVPVLTEDSTANEVVVLDIPDKAE
ELKSLFVGRHFEAIYFKNHIKRAYYLTGYGTRDQFAKLYKTIYQFPEFDVRYKLKELSQY
LNIPDILLIKMIQIFDELDFVTITDGVMVVNKDAQKRSISESQIYQDLKQQVKFQELMAL
ATPQEIYEWLINESDE
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgataacaagtaaatacaattggaaaaatattgaaaaagagccagataatggctttttt
gagctgacaaaaaaagaaaaactaacagaattagctagtcagattctttatagtcgaggt
gttgatacggcagaaaaattgattcaatttttatcaacggatttgtcacaattgcatgac
ccttaccttttacatgacatggataaagcggttaatcgtattcgccaagctattgagaat
tacgagcaaatcttggtttatggtgattatgatgctgacggaatgactagtgccagcatt
atgaaagaagcccttgaaatgttgggtgccgaagcccaagtttatctgccaaatcgtttc
acagatggttacggcccaaatgaatcagtctataaatatttcattgagcagcaaaacgtt
tctttgattattacggtggacaatggcgtagcagggaacgaagcgattgcctacgcacaa
agtcagggggtagatgtcattgtgacagaccaccacggtttgccagcagagctaccagaa
gcatttgcgattgtgcacccagaacacccagaagctgattatccgttcaaatatctggct
ggctgtggcgttgctttcaaagttgcttgtgctttgctagaatctattccgacagaaatg
cttgatctggtggcaattggaacaattgctgatatggtgagtttgactgatgaaaaccgc
attatggttaaagttggacttgaaattctgaaacaaaccgaacgcattggtctgattgaa
ttgataaaagtatcagatgtggatatggcagatgtcaatgaagaaacggttggtttcaaa
attgctccgcagctaaatgcacttggtcgcctagatgacccaaatcctgctgtcgaatta
ttgactggctttgatgatgaagaagcgcataacattgccaagatgattaatgctaaaaac
gaagagcgcaaggaaattgttcagaaaatcttcgatgaagccatgagcatggttgatttg
gaaaagccagtgcaagtattggctaaagaaggctggcacccaggcgttttaggaattgtc
gcagggcgtattttagaacaaatcgcgcagccagtgattgttttaaatatcgaagatggg
attgctaaaggttctgccagaagtatcgaggccattaatattttccatgctcttgatgag
caccgtgatttatttgaagcctttggtggacacgctggcgctgctggaatgactttggtg
actgaaaatcttgataaattatcacaagttttgtgtgattatattgctgaaaatgatatt
gacttatcacagaaaaaagagcttgttattgatgaggttctggagctctcagagattaac
cttgataccgtgcacagtcttgaaaaattggcaccatttggcatggacaatccaaaacca
gtctttgaaattaaagattttgtggtgaaacaagcacgcactatggggcaaaatggtgcg
catttaaaattaaaaattgcccaaggtacaacggcaattgactttgttgcctttaatcaa
ggacatctggcgcaggaatttcaacaagtgcaaaatctttgccttgcaacgacattatcg
attaataagtggaatgggcaaacgactgttcaattaatgttggaagatgcgcgtgttgag
ggtgttcagttgattgatattcgctccaaaacggctagccttccagaacgtgttccagta
ttgactgaagatagcacggcaaatgaagttgtggtgttagacatccctgataaggctgaa
gaattaaaatcactctttgtgggtcgtcattttgaagccatttattttaaaaatcatatt
aaacgtgcttattatctgacaggctatggcacacgtgaccaatttgctaagctttataaa
accatttatcaattcccagaatttgatgtccgctacaagttgaaagaattgagccaatac
cttaatatccctgatattttgctcattaaaatgattcagatttttgatgaattagatttt
gtaaccatcacagatggtgttatggtcgtcaacaaagatgctcagaaacgcagtatttca
gaaagccaaatctaccaagacctcaaacaacaagttaaattccaagaattgatggcacta
gctactccccaagaaatatatgagtggttgattaatgaaagtgatgagtag
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