Sporomusa termitida: SPTER_27840
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Entry
SPTER_27840 CDS
T06115
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sted
Sporomusa termitida
Pathway
sted03420
Nucleotide excision repair
sted03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPTER_27840 (pcrA)
03430 Mismatch repair
SPTER_27840 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sted03400
]
SPTER_27840 (pcrA)
Enzymes [BR:
sted01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPTER_27840 (pcrA)
DNA repair and recombination proteins [BR:
sted03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPTER_27840 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SPTER_27840 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
AAA_14
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QDR81404
UniProt:
A0A517DVL3
LinkDB
All DBs
Position
complement(2886090..2888312)
Genome browser
AA seq
740 aa
AA seq
DB search
MNKIYDRLNPAQQDAVAHTNGPLLIMAGAGSGKTKVLTSRIANLLAQGVAPYNILAITFT
NKAAAEMKERVTSLVGPAARDIWLSTFHAFCAKFLRIEIENLGGYNRNFVIYDASESQTL
IKNCIRDLNLDDKQFTPGGVQATISNAKNALQDVREFTSQADNFYNLKVAEVYKLYQSKL
KVHNALDFDDLLMLSVELLEYNAMVREKYQDKFHYILIDEYQDTNRAQYLLARTLAAKYR
NLCVVGDVDQSIYAWRGADIQNILDFEKDYPDAKVIKLEQNYRSTQTILDAANAVIENNC
NRKAKSLWTDNQAGDAITHYLAMDERDEARHIADTIIKLNTVYRTPYKDIAILYRTNAQS
RAIEEGLRNGAIPYTMVGGLRFYDRKEIKDIMAYVKLVFNPADAISLLRIINVPRRGIGD
TTIGRLADYAAHNEVPLFDAVSNPDLVPGLTARAKNQLESLAALIFNLMACQHTLAVADL
LEKVMRDSGYLAELEIDSDPQAETRIENLKELKSDAKKFAENEEDNTLENFLSHVALLTD
TDKAETGDDKVTLMTLHSAKGLEFPTVFLAGLEEGIFPHVRTLMNEQEVEEERRLCYVGI
TRAERKLFVSNARQRMIYGNSVCYAPSRFLDEIPPALIERYAPRRPGYLAPVPGRPAAAT
VMPSRAMPKPELILLKDQVQSGAQPVNTDWKPGEKVYHAKWGTGTVVAVTGSGSSLQLSI
AFPNEGIKKLLAQMAPISRL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatttatgaccgcctgaacccggcccagcaggacgctgtcgcccacaccaac
ggaccgctcctgattatggccggggccggttcaggcaaaaccaaggtattgacgagccgg
attgccaacctgctggcgcagggggtggcgccttacaatattcttgctatcaccttcacc
aacaaagccgctgcggaaatgaaggaacgggtaacaagccttgtcggtccggcggcccgg
gatatctggctgagtacatttcacgccttttgtgccaaattcctgcggatagagattgaa
aacctgggcgggtacaaccgcaattttgttatttatgatgccagcgaatcccagacactt
atcaagaactgcattcgggacctgaatctggatgataagcaatttacccccggcggtgtc
caggctacgatctcgaatgctaaaaatgccctgcaggatgtacgggaatttacctctcag
gccgataatttctataacctcaaggtggctgaggtatacaagctgtatcagagcaaacta
aaagtacataatgccctggattttgacgatcttttgatgctgtcggttgaattgctggaa
tataatgccatggttcgggaaaaatatcaggataagttccattatatattgattgacgaa
tatcaggacacgaaccgggcccagtatctgctggcccggaccctggcggccaaataccgc
aacctgtgtgttgtcggcgatgttgatcagagcatttatgcctggcggggagcggatatt
caaaacatcctggattttgaaaaagattatcctgatgccaaggtcatcaaactggaacaa
aactaccggtcgacgcaaacgattctggatgctgccaatgcggttatcgaaaacaactgc
aaccgcaaggccaagtcattgtggaccgataatcaggccggtgatgcaatcactcattac
ctggccatggatgagcgggacgaggcccggcatattgccgataccatcattaagctgaat
acggtataccgcacaccttataaggatattgccatcctgtaccggactaacgcccagtcc
cgggcgatagaggaaggcctgcgcaacggtgcgatcccctatacgatggtgggcgggctg
cgcttctatgaccgcaaggaaattaaagatatcatggcctatgttaagctggtgtttaat
ccggccgatgccatcagcctgctgcgcatcatcaatgtgccgcgccggggcattggcgac
actaccattgggcgtctggccgattatgcggcccacaacgaggtgccgctgtttgatgcc
gtatccaatcctgacctggttccgggccttaccgcccgggccaaaaatcagctggaatca
ttagctgccctgattttcaacctgatggcctgccagcataccctggcggtagccgacctg
ctggaaaaagtgatgcgcgattcagggtatctggcggagctggaaatcgacagtgaccct
caggcggagacccggattgaaaacctgaaagaactcaaaagtgatgccaaaaaatttgcc
gaaaatgaagaggataacaccctggaaaatttcctgagccatgtggccctgttgacagat
actgataaagcggaaaccggtgatgacaaggttacgctgatgaccctgcattcggccaag
ggcctggagtttcccaccgtattcctggctggtttggaagaggggattttccctcatgtc
cgcaccctgatgaatgaacaggaggtcgaggaggaacgccggctgtgttatgtcggcatt
acccgggcggagcgcaaattgtttgtttccaatgccagacagcgtatgatctatggtaat
tcggtatgctacgcgccctcccgctttttggatgagattccaccggcgctgattgaacgg
tatgcgccccggcgccccggctatttagcccctgtgcccggccgcccggccgccgcaacc
gtgatgccgtcccgggcgatgcccaaaccggagctgattttgctcaaggaccaggttcag
tctggggctcaacctgtcaataccgactggaagccgggggaaaaggtctatcatgccaag
tggggcacaggcacggttgttgccgtcaccggcagcggcagcagcctgcagcttagtatt
gcgtttcctaatgaaggcataaaaaaactgctggcccaaatggcaccaatcagcaggctg
taa
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