Stenotrophomonas sp. KCTC 12332: AXG53_07160
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Entry
AXG53_07160 CDS
T04408
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stek03009
]
AXG53_07160
Enzymes [BR:
stek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
AXG53_07160
Ribosome biogenesis [BR:
stek03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AXG53_07160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AMJ56450
UniProt:
A0A126NHQ7
LinkDB
All DBs
Position
complement(1675853..1676560)
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AA seq
235 aa
AA seq
DB search
MKLVKHIANLGYGSRKQVQQLFREGRVSDAQGEVLYADDKVEHANIRIDGEVLDPPPGLI
LMLHKPAGYTCSTKDHGRLIYELLPPRFRDRDPVLSSVGRLDRDTSGMLLMTDDGQLLHR
IVSPKSKLDKVYEAQLAEDLSGSEAVQFGSGTLLLESDDKPLLPAELEVLGPRAARLTLH
EGRYHQVRRMFAAVGNHVQALHRLRIGGLGLGDLAEGQWRQLDAADLAVLFGEPA
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtcaagcacatcgccaacctgggttacggcagccgcaagcaggtgcagcag
ctgtttcgcgaaggccgcgtcagtgatgcgcagggcgaggtgctgtatgccgatgacaag
gtggagcacgccaacatccgtatcgatggcgaagtgctggacccgccgccgggcctgatc
ctgatgctgcacaagccggccggctacacctgttccaccaaggaccatggccgcctgatc
tatgagctgctgccgccgcgtttccgcgaccgtgacccggtgctgtccagcgtcggccgg
ctcgatcgcgacacctcaggcatgttgctgatgaccgatgacggccagctgctgcaccgg
atcgtgtcgcccaagtcgaagctggacaaggtttacgaggcgcagctggcggaagatctg
agcggcagcgaagcggtgcagttcggcagtggcacgctgttgctggaatcggacgacaag
cccttgctgccggcggagctcgaggtgcttggcccgcgcgccgcgcgcttgacgctgcac
gaaggtcgttaccaccaggtgcggcgcatgtttgccgcagtgggcaaccacgtgcaggca
ctgcaccgcttgcgtattggcgggctgggcctgggcgatctggccgaaggccaatggcgt
cagctggatgccgccgatctggccgtgctgtttggagagcccgcctga
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