Stenotrophomonas sp. MYb57: CLM74_00010
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Entry
CLM74_00010 CDS
T05384
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem03030
DNA replication
stem03430
Mismatch repair
stem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLM74_00010
03430 Mismatch repair
CLM74_00010
03440 Homologous recombination
CLM74_00010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stem03032
]
CLM74_00010
03400 DNA repair and recombination proteins [BR:
stem03400
]
CLM74_00010
Enzymes [BR:
stem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLM74_00010
DNA replication proteins [BR:
stem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLM74_00010
DNA repair and recombination proteins [BR:
stem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLM74_00010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
DUF6212
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
AVJ31277
LinkDB
All DBs
Position
1609..2709
Genome browser
AA seq
366 aa
AA seq
DB search
MRFTLQREAFLKPLAQVVNVVERRQTLPVLANFLVQVQNGQLSLTGTDLEVEMVSRIAVE
DAQDGETTIPARKLFEIIRALPDGSRITVSQTGDKITVQAGRSRFTLATLPSNDFPSVDE
VEATERVAIGEATLKELIERTAFAMAQQDVRYYLNGLLFDLRGDALRTVATDGHRLALCE
TDLAKPSGSKRQIIVPRKGVTELQRLLESGDREIELEVGRSHVRVKRDDVTFTSKLIDGR
FPDYEAVIPIGADREVKVDREALRASLQRAAILSNEKYRGIRVEVSPGNLKISAHNPEQE
EAQEEIEADTTVSDLAIGFNVNYLLDALSALRDEEVIIQLRDSNSSALVRESSSEKSRHV
VMPLRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcacactgcagcgcgaagcctttctcaagccgttggcacaggtcgtcaacgtg
gtcgaacgccgccagacccttccggttctggccaatttcctggtgcaggtgcagaacggc
cagctgtcgctgaccggtaccgacctggaagtggagatggtgtcgcggatcgcggttgaa
gatgcccaggacggcgaaaccaccattcccgcccgcaagctgttcgagatcatccgcgcc
ttgcctgatggcagccggatcaccgtctcgcagaccggtgacaagatcaccgtgcaggca
ggacgcagccgcttcaccctggccaccctgccctccaacgacttcccgtcggtggacgaa
gtggaagccaccgagcgtgttgcgatcggcgaagcaaccctgaaggagctgatcgagcgc
actgcgttcgcgatggcccagcaggacgtgcgctattacctcaacggcctgctgttcgac
ctgcgcggtgatgcgctgcgcaccgtcgccaccgacggccatcgcctggccctgtgcgaa
accgatctggccaagcccagcggttccaagcgccagatcatcgtgccgcgcaagggcgtg
accgagttgcagcgcctgctggaaagcggtgatcgcgagatcgaactggaagtcggccgt
agccacgttcgcgtgaagcgcgacgatgtcaccttcacttcgaagctgatcgacggtcgc
ttcccggactacgaggcagtgattccgattggtgccgaccgcgaggtgaaggttgatcgc
gaagcactgcgtgcctcgctgcagcgtgctgcgatcctgtccaacgagaagtaccgcggc
atccgcgtggaagtttcgccgggcaacctgaagatcagcgcgcacaacccggagcaggaa
gaagcccaggaagagatcgaggccgacaccacggtcagcgacctggccatcggcttcaac
gtgaactacctgctggatgccctctccgccctgcgcgacgaagaagtgatcatccagttg
cgcgattccaattcctcggcgctggtgcgtgaatcgagcagcgagaagtcgcgtcatgtg
gtgatgccgttgcgtctctga
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