KEGG   Sphingopyxis terrae: AOA14_10025
Entry
AOA14_10025       CDS       T04307                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
ster  Sphingopyxis terrae
Brite
KEGG Orthology (KO) [BR:ster00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ster03016]
    AOA14_10025
Enzymes [BR:ster01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AOA14_10025
Transfer RNA biogenesis [BR:ster03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AOA14_10025
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AMU94941
UniProt: A0A142VYW7
LinkDB
Position
complement(2068923..2069540)
AA seq 205 aa
MTVYFHEEDLPEGAIGPGPVAIDTETMGLNPLRDRLCLVQISDGKGDEHLVRFGPGSRYD
APVLKAILTDPDRLKLFHFARFDIAAMQQALGVVTAPVYCTKIASKLVRTYTDRHGLKEL
VRELLGQDVSKQQQSSDWGAAELSEAQRDYAASDVRFLHAMKEVLDARLAREGRTELAQS
CFDFLPTRAALDLAGWPEVDIFAHS
NT seq 618 nt   +upstreamnt  +downstreamnt
atgaccgtatatttccacgaagaagatctgccggaaggcgcgatcggccccggccccgtc
gcgatcgacaccgaaaccatgggactcaacccgctgcgcgaccggctgtgcctcgtccag
atcagcgacggcaagggcgacgagcatctggtgcgattcggccccggcagccgctatgac
gcaccggtcctcaaggcgatcctcactgatcctgaccggctgaaactgttccatttcgcc
cgtttcgatattgccgcgatgcagcaggcgctcggcgttgtcaccgcccccgtctattgc
accaagatcgcgtcgaagctggtgcgcacctacaccgaccgccacgggctcaaggaactg
gtccgcgaactgctgggacaggatgtatcgaagcagcagcagtcgagcgactggggcgct
gccgaactgagcgaggcgcagcgcgactatgccgcgagcgatgtccgctttctgcacgca
atgaaggaggtgctcgacgcccgcctcgcgcgcgaggggcgcaccgaactcgcacaatcc
tgcttcgatttcctcccgacgcgcgccgcgctcgacctcgccggatggcccgaggtcgac
atcttcgcgcatagctga

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