Symbiobacterium thermophilum: STH171
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Entry
STH171 CDS
T00196
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
sth
Symbiobacterium thermophilum
Pathway
sth03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STH171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sth03400
]
STH171
DNA repair and recombination proteins [BR:
sth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STH171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
UVR
GIY-YIG
HHH_2
HHH
5_3_exonuc
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
BAD39156
UniProt:
Q67T37
LinkDB
All DBs
Position
198910..200799
Genome browser
AA seq
629 aa
AA seq
DB search
MGLEEQLRLLPDRPGCYLFKDASGRIIYVGKARNLKNRVRQYFQSSRNLTAKVLAMVGQI
VEIEHIVTDTETEALVLESNLIKKHKPKYNIRLRDDKHYPYLRLTLTEQWPRLVVARSMK
KDGSRYFGPYTSSQAMWETMKLARRLFPLRTCNDPSRYPRGCLQYHIGRCLGPCLPDFDR
HREYAEAVRDLQAFLEGRTQEVLERLRARMEQAAERLEFERAAELRDQIRAIEKVTEKQK
IIAHTMVDLDVIAYARLYDEAGVQVFFVRQGKLVGRDQFLMSGADEMTGGEILAAFIQQH
YSQTDFVPKEILVSEDLPDADVIAEWLSAKRGSRVALRCPKRGEKRALVEMVAQNAQEAM
TERRQQRELELAATEGVLRELQAYLDLPRLPHRIECFDVSHVQGAEVVASMVVFEGGRPK
KSDYRRFKMKVDQNNDFANMAEAVGRRFRRGLAERAAQVEGRVRDLEEGRVAEGGAEYGG
KFADFPDLLIIDGGKGQLSYARAVMRELGVDHIPTFGLAKENELLCTEDRPDWIELPRGS
QALFLLQRIRDEAHRFAITYHRKLHRRASTHSRLDDVPGIGPKRKKALLQHFGSLKAIRE
ASVEEVAQVPGITLELAERVKEALGGPMR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
gtgggcctggaggagcaactcagactgctgcccgaccggccgggctgctacctgttcaag
gacgcctccggacgcatcatctacgtgggaaaggcccggaacctgaagaaccgggtgcgc
cagtatttccagtcctcccgcaacctgaccgccaaggtgctcgcgatggtcggccagatt
gtggaaatcgaacacatcgtgaccgatacggaaacagaggcgctggtcctggagtctaac
ctgataaagaagcacaagcccaagtacaacatccggctgcgggacgacaagcactacccg
tacctgcggctgaccctcacggagcagtggccgcgcctggtggtggcccgctccatgaag
aaggacgggtcccgctacttcgggccgtacaccagcagccaggccatgtgggagaccatg
aagctggcccggcggctgtttcccctgcgcacgtgcaacgacccttcccggtatccccgc
ggctgcctgcagtaccacatcggtcggtgcctgggaccctgcctgcccgacttcgaccga
caccgggagtacgccgaggcggtgcgcgacctgcaggcgttcctggagggccgcacgcag
gaggtcctggagcggctgcgcgcccgcatggagcaggcggcggagcggctggagttcgag
cgggccgccgagctgcgggaccagatccgggcgatcgagaaggtcaccgaaaagcagaag
atcatcgcccacacgatggtggacctggacgtcatcgcctacgcccggctgtacgacgag
gccggcgtgcaggtcttcttcgtccggcaggggaagctggtggggcgcgaccagttcctc
atgtccggcgcggacgaaatgacggggggcgagatcctggccgccttcatccagcagcat
tacagccagaccgacttcgtgcccaaggagatcctggtcagcgaggacctcccggacgcc
gacgtcatcgcggagtggctctccgccaagcggggatcccgggttgcgctccgctgcccc
aagcggggcgagaagcgggccctggtggagatggtggcgcagaacgcgcaggaggccatg
acggagcgccggcagcagcgggaactggagctggccgcgaccgagggcgtgctccgggag
ctgcaggcgtacctggacctcccgcggctgccgcaccgcatcgagtgcttcgacgtctcc
catgtgcagggcgccgaggtcgtggcgtccatggtggtcttcgagggtggcagacccaag
aagtccgactaccgccggttcaagatgaaggtggaccagaacaacgacttcgccaacatg
gccgaagcggttgggcgccggttccggcgcgggctggccgagcgggccgcccaggtggaa
gggcgcgtgcgcgacctggaggaggggcgcgtggccgaaggcggggcggagtacggaggc
aagttcgccgactttcccgatctgctgatcatcgacggcggtaaggggcagctctcctac
gcccgggccgtcatgcgggaactgggcgttgaccacatccccaccttcggactggccaag
gagaacgagctgctctgtacggaggaccggccggactggatcgagctgccccggggctcc
caggcgctcttcctgctgcagcggatccgggacgaggcgcaccgcttcgcgatcacctac
caccgcaagctgcaccgcagggccagcacccacagccgcctcgacgacgtgcccggcatc
gggcccaagcggaagaaggccctgctgcagcacttcggctcgctgaaggcgatccgggaa
gcctcggtggaggaggtcgcgcaggtgccggggatcacgctggagttggcggagcgggtg
aaggaggccctgggcggtccgatgcgctga
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