Symbiobacterium thermophilum: STH1917
Help
Entry
STH1917 CDS
T00196
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sth
Symbiobacterium thermophilum
Pathway
sth00260
Glycine, serine and threonine metabolism
sth00460
Cyanoamino acid metabolism
sth00630
Glyoxylate and dicarboxylate metabolism
sth00670
One carbon pool by folate
sth00680
Methane metabolism
sth01100
Metabolic pathways
sth01110
Biosynthesis of secondary metabolites
sth01120
Microbial metabolism in diverse environments
sth01200
Carbon metabolism
sth01230
Biosynthesis of amino acids
sth01240
Biosynthesis of cofactors
Module
sth_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
STH1917
09102 Energy metabolism
00680 Methane metabolism
STH1917
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
STH1917
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
STH1917
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
STH1917
Enzymes [BR:
sth01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
STH1917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Poly_A_pol_cat
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
BAD40902
UniProt:
Q67N41
LinkDB
All DBs
Position
complement(2060109..2061347)
Genome browser
AA seq
412 aa
AA seq
DB search
MDALKRYDPEVFAAIQQEVERQQRNIELIASENFVPKAVLEAAGTVLTNKYAEGYPGRRY
YGGCEYVDIVENIARERLKAAFGAEHVNVQPHSGANANTAVYFAFLQPGDTVLGMNLAQG
GHLTHGSPVNFSGRTYNFVPYGLDPETERINMDQVAELARQHRPKLIVAGYSAYPRVLDF
KRFREIAEEVGAILMVDMAHFAGLAATGYYPNPVEHAHVVTTTTHKTLRGPRGGAILCKK
EFAKEIDKAVFPGMQGGPLMHIIAAKAVAFKQLSDPDYRAYCGQVVKNAKALAQALLERG
YRLVTGGTDNHLMLVDLRPKGITGRDAEHLLDRVSITVNKNAIPNDPEKPMVTSGIRIGT
PAMTTRGMKEAEMVQIADLIDRAITHRNDEAELDRIRAEVHELTARFPLYAD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggatgcactgaagcggtatgatcccgaggtcttcgcggccattcagcaggaggtcgag
cggcagcagcgcaacattgagctgatcgcctcggagaacttcgtgcccaaggcggtcctc
gaggcggcgggcacggtgctcaccaacaagtacgccgagggctatcccggccggcggtac
tacggcggctgcgagtacgtggacatcgtggagaacatcgcccgggagcggctgaaggcg
gccttcggcgcggagcacgtcaacgtccagccgcactcgggggccaacgccaacacggcg
gtctacttcgccttcctccagcccggcgatacggtgctgggcatgaacctggcccagggc
ggccacctgacccacggctcgccggtcaacttcagcggcaggacttacaacttcgtgccc
tacggcctggacccggagaccgagcggatcaacatggaccaggtggcggagctggcccgg
cagcaccggcccaagctcatcgtcgccggctactcggcctacccgcgggtcctggacttc
aagcggttccgggagatcgccgaagaggtgggcgccatcctgatggtggacatggcccac
ttcgccggcctggcggccacgggctactacccgaacccggtggagcacgcgcacgtggtc
accaccaccacccacaagacgctgcgcgggccgcggggcggggcgatcctctgcaagaag
gagttcgccaaggagatcgacaaggcggtcttcccgggcatgcagggcggccccctgatg
cacatcatcgccgccaaggcggtggccttcaagcagctctccgacccggactacagggca
tactgcggccaggtggtgaagaacgccaaggccctggcccaggcgctgctggagcggggc
taccggctggtcaccggcggcaccgacaaccacctgatgctggtggacctgcggcccaag
ggcatcaccggccgggacgcggagcacctgctggacagggtctcgatcacggtcaacaag
aacgccatccccaacgaccccgagaagccgatggtgaccagcggcatccgcatcggcacc
ccggccatgaccacccgggggatgaaggaggccgagatggtccagatcgccgacctcatc
gaccgggccatcacccaccggaacgacgaggcggagctggaccggatccgggcggaggtg
cacgagctcacggcccggttcccgctctacgccgactag
DBGET
integrated database retrieval system