Sphingobacterium thalpophilum: NCTC11429_01167
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Entry
NCTC11429_01167 CDS
T06778
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha00061
Fatty acid biosynthesis
stha00540
Lipopolysaccharide biosynthesis
stha01100
Metabolic pathways
stha01212
Fatty acid metabolism
Module
stha_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NCTC11429_01167 (lpxC)
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC11429_01167 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
stha01005
]
NCTC11429_01167 (lpxC)
01004 Lipid biosynthesis proteins [BR:
stha01004
]
NCTC11429_01167 (lpxC)
Enzymes [BR:
stha01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
NCTC11429_01167 (lpxC)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
NCTC11429_01167 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
stha01005
]
Lipid A
NCTC11429_01167 (lpxC)
Lipid biosynthesis proteins [BR:
stha01004
]
Fatty acid synthase
Component type
NCTC11429_01167 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
Motif
Other DBs
NCBI-ProteinID:
VTR33425
UniProt:
A0A4U9UIW3
LinkDB
All DBs
Position
1:complement(1261647..1263047)
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AA seq
466 aa
AA seq
DB search
MNVKQRTIKNEVEISGVGLHTGKIVSMTIKPAPENHWFKFRRVDLEGQPEILVDADNVTD
TSRGTTISQNGASVSTIEHLMASLIGLQIDNVLIDIDGPEIPILDGSAAIFVKLLEEAGF
EEQEADRDYYEISNNIHYAEPDRKVEILGMPMDGYRLTCMIDFNSPVLGSQHAAITSIED
FKSEIASSRTFCFLHELEMLVDHGLIKGGDLSNAIVIVDKETSPEELQKLAHLFHKETVA
VAKEGILNNNQLRHQNEPARHKLLDMVGDLALVGRPLKGHIMAARPGHAANVAFAKKIKE
QIKKDKTRKRVKVYDPNMPALYDTVEIMKILPHRQPMLMVDKILELTETHVVGLKNVTMN
EDLFMGHFPGAPLFPGVLQVEAMAQTGGILVLKTVPDPENWLTLFLKIENARFKAQVTPG
DSVIFRCDLMEPIRRGIAKMKGVAMVGEKIVCEAELMAQIVRVNNN
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaacagagaaccatcaaaaacgaggtcgaaatttcgggggtaggtcttcat
acagggaaaatagtatcgatgaccatcaaaccagctccggaaaatcactggtttaagttc
cggcgtgtggatttagaaggacagcctgaaatattggttgatgcggataatgtcaccgat
acttccagaggaaccactatttctcaaaacggcgcgagtgtcagtacaatagagcattta
atggcttccttgatcggtctgcagatcgacaatgtactgatcgatattgatggtcctgaa
attcctatattagatggcagtgcggcaatttttgttaaattgctggaggaggctggattt
gaagaacaggaggccgatagagattattatgaaatttcgaataatatccattatgccgag
ccagatcgtaaagtagagattctgggtatgcctatggacggttaccgtctgacctgtatg
atcgactttaattcacctgtgctgggcagccagcatgcagccattacttctattgaagat
ttcaagtcagagattgcttcttcacgcacgttctgttttctgcacgagttggaaatgttg
gtcgaccacgggctgattaagggtggcgacctaagcaatgccattgtgattgtcgataaa
gaaacctcacccgaagagcttcagaaacttgctcatcttttccataaagagactgttgct
gtcgcaaaagagggaatattaaacaataatcaactacgtcaccagaatgaaccggcccga
cacaaactgttggatatggtcggggacttagcattggttggaaggccgctgaaagggcac
atcatggctgcccgccccgggcatgcggcgaatgtagcttttgccaagaaaatcaaggag
cagattaagaaagacaaaacgcgtaaaagagtcaaggtttatgacccgaatatgccggca
ttgtacgataccgtggaaattatgaaaatcctcccgcatcgtcaaccgatgctgatggtc
gataagattttggaattaaccgagacccatgttgtcggtttaaagaatgtcacgatgaac
gaggatctgtttatgggacattttcccggcgccccgttattccccggcgtattgcaggtg
gaagccatggcacagacaggcggtattctggtactaaagactgttccggatcctgagaac
tggctgacgctatttcttaaaattgagaatgcacgttttaaggcgcaggtgactccggga
gattccgtgatctttaggtgtgacctgatggagcctattcgtcgagggatagcgaaaatg
aagggggttgccatggtgggagagaagatcgtctgcgaggccgaacttatggctcaaatc
gtaagagtaaataacaactaa
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