Sphingobacterium thalpophilum: NCTC11429_04716
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Entry
NCTC11429_04716 CDS
T06778
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha00540
Lipopolysaccharide biosynthesis
stha01100
Metabolic pathways
stha01250
Biosynthesis of nucleotide sugars
Module
stha_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC11429_04716 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
stha01005
]
NCTC11429_04716 (kdsA)
Enzymes [BR:
stha01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NCTC11429_04716 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
stha01005
]
Lipid A
NCTC11429_04716 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
VTR52991
UniProt:
A0A4U9W2U8
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Position
1:complement(5336528..5337343)
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AA seq
271 aa
AA seq
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MINNYIPEIKNGTSQNFFLMAGPCAIEGEDIALRIAEKIVAITDKLNIPYIFKGSYRKAN
RSRLDSFMGIGDEKALKILEKVGRTFAVPTVTDIHESHEAEMAAAYVDVLQIPAFLCRQT
DLLVAAAKTNKVVNVKKGQFLSAGSMKFAVDKIVESGNDKVLLTDRGNTFGYQDLIVDYR
GIPEMRSFNVPTIMDCTHSLQQPNQTSGVTGGKPALIETIAKAAIAVGADGLFIETHPDP
ANAKSDGANMLHLDLLEGLMEKLVRIRQAIL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacaactacattcctgaaataaagaatggtacctcgcagaatttctttttgatg
gccgggccctgtgcgattgaaggagaagatatcgctttacggattgctgaaaagattgtt
gcgattacggataaattaaatattccctatatttttaaaggatcctaccgcaaagctaac
cgctcgcgtttagattcttttatgggaataggagacgaaaaagcactcaaaatattggag
aaagtaggccgtacttttgctgtgccaacggtaacggatattcacgagagtcatgaggcc
gaaatggctgcggcttacgtggatgtgttgcagattccggcgtttttatgtcgtcagaca
gatctgttggtagcggctgcaaaaacaaataaagtcgtgaacgtcaagaaagggcaattt
ttgagcgccggatcaatgaagtttgctgttgacaaaattgtggaatctggcaatgataag
gtacttttgacagaccggggcaatacgttcggttaccaggatctgatcgttgattatcgg
ggcattcctgaaatgcgttcgtttaatgtccccaccattatggactgcacccactccctt
cagcagcccaatcagacttccggtgtgactggaggaaagccggcattgatcgaaaccatt
gcaaaagctgcaattgctgtcggagccgatggtctctttatcgagacacatccagatccg
gcgaatgcaaagtcggatggagccaatatgctacatctcgatctgttggaaggattgatg
gagaaactggtccgtattagacaagcaattttatag
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